Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ShfQ8CG80 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShfQ8CG80 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.7■□□□□ 0.42
ShfQ8CG80 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.7■□□□□ 0.42
ShfQ8CG80 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ShfQ8CG80 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShfQ8CG80 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShfQ8CG80 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.7■□□□□ 0.42
ShfQ8CG80 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShfQ8CG80 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.7■□□□□ 0.42
ShfQ8CG80 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShfQ8CG80 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ShfQ8CG80 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ShfQ8CG80 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.7■□□□□ 0.42
ShfQ8CG80 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ShfQ8CG80 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShfQ8CG80 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.69■□□□□ 0.42
ShfQ8CG80 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
ShfQ8CG80 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ShfQ8CG80 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ShfQ8CG80 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ShfQ8CG80 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShfQ8CG80 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShfQ8CG80 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ShfQ8CG80 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShfQ8CG80 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShfQ8CG80 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.68■□□□□ 0.42
ShfQ8CG80 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShfQ8CG80 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ShfQ8CG80 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShfQ8CG80 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.67■□□□□ 0.42
ShfQ8CG80 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.67■□□□□ 0.42
ShfQ8CG80 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ShfQ8CG80 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShfQ8CG80 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShfQ8CG80 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShfQ8CG80 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShfQ8CG80 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShfQ8CG80 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.66■□□□□ 0.42
ShfQ8CG80 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShfQ8CG80 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShfQ8CG80 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShfQ8CG80 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShfQ8CG80 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShfQ8CG80 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShfQ8CG80 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShfQ8CG80 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShfQ8CG80 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShfQ8CG80 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShfQ8CG80 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.65■□□□□ 0.42
ShfQ8CG80 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.65■□□□□ 0.42
ShfQ8CG80 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ShfQ8CG80 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ShfQ8CG80 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ShfQ8CG80 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ShfQ8CG80 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShfQ8CG80 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShfQ8CG80 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ShfQ8CG80 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShfQ8CG80 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShfQ8CG80 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShfQ8CG80 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShfQ8CG80 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.64■□□□□ 0.41
ShfQ8CG80 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShfQ8CG80 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.64■□□□□ 0.41
ShfQ8CG80 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ShfQ8CG80 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShfQ8CG80 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.64■□□□□ 0.41
ShfQ8CG80 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShfQ8CG80 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShfQ8CG80 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShfQ8CG80 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShfQ8CG80 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ShfQ8CG80 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ShfQ8CG80 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.63■□□□□ 0.41
ShfQ8CG80 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.63■□□□□ 0.41
ShfQ8CG80 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShfQ8CG80 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.63■□□□□ 0.41
ShfQ8CG80 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShfQ8CG80 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ShfQ8CG80 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ShfQ8CG80 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ShfQ8CG80 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShfQ8CG80 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShfQ8CG80 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
ShfQ8CG80 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.62■□□□□ 0.41
ShfQ8CG80 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShfQ8CG80 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShfQ8CG80 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShfQ8CG80 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShfQ8CG80 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShfQ8CG80 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ShfQ8CG80 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShfQ8CG80 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ShfQ8CG80 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ShfQ8CG80 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ShfQ8CG80 Etf1-202ENSMUST00000180351 108 ntBASIC17.61■□□□□ 0.41
ShfQ8CG80 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.61■□□□□ 0.41
ShfQ8CG80 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ShfQ8CG80 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms