Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab43Q8CG50 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab43Q8CG50 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.38■□□□□ 0.69
Rab43Q8CG50 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rab43Q8CG50 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab43Q8CG50 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab43Q8CG50 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Rab43Q8CG50 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab43Q8CG50 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab43Q8CG50 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab43Q8CG50 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.37■□□□□ 0.69
Rab43Q8CG50 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab43Q8CG50 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rab43Q8CG50 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab43Q8CG50 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.36■□□□□ 0.69
Rab43Q8CG50 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.36■□□□□ 0.69
Rab43Q8CG50 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
Rab43Q8CG50 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab43Q8CG50 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab43Q8CG50 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab43Q8CG50 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab43Q8CG50 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rab43Q8CG50 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab43Q8CG50 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab43Q8CG50 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.35■□□□□ 0.69
Rab43Q8CG50 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rab43Q8CG50 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rab43Q8CG50 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.35■□□□□ 0.69
Rab43Q8CG50 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.35■□□□□ 0.69
Rab43Q8CG50 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rab43Q8CG50 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.35■□□□□ 0.69
Rab43Q8CG50 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab43Q8CG50 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab43Q8CG50 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rab43Q8CG50 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab43Q8CG50 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.34■□□□□ 0.69
Rab43Q8CG50 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rab43Q8CG50 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.34■□□□□ 0.69
Rab43Q8CG50 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab43Q8CG50 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rab43Q8CG50 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab43Q8CG50 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rab43Q8CG50 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rab43Q8CG50 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab43Q8CG50 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab43Q8CG50 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab43Q8CG50 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab43Q8CG50 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab43Q8CG50 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab43Q8CG50 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rab43Q8CG50 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rab43Q8CG50 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.33■□□□□ 0.68
Rab43Q8CG50 Gm27801-201ENSMUST00000184174 223 ntBASIC19.33■□□□□ 0.68
Rab43Q8CG50 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.33■□□□□ 0.68
Rab43Q8CG50 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab43Q8CG50 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab43Q8CG50 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab43Q8CG50 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab43Q8CG50 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab43Q8CG50 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rab43Q8CG50 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.32■□□□□ 0.68
Rab43Q8CG50 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab43Q8CG50 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.31■□□□□ 0.68
Rab43Q8CG50 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab43Q8CG50 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab43Q8CG50 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.3■□□□□ 0.68
Rab43Q8CG50 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab43Q8CG50 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab43Q8CG50 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab43Q8CG50 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.3■□□□□ 0.68
Rab43Q8CG50 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab43Q8CG50 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.3■□□□□ 0.68
Rab43Q8CG50 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.3■□□□□ 0.68
Rab43Q8CG50 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab43Q8CG50 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab43Q8CG50 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rab43Q8CG50 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab43Q8CG50 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Rab43Q8CG50 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.29■□□□□ 0.68
Rab43Q8CG50 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.29■□□□□ 0.68
Rab43Q8CG50 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab43Q8CG50 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab43Q8CG50 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Rab43Q8CG50 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab43Q8CG50 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab43Q8CG50 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rab43Q8CG50 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Rab43Q8CG50 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms