Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc28aQ8CEI3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc28aQ8CEI3 Gm10232-201ENSMUST00000089221 720 ntBASIC20.89■□□□□ 0.93
Ccdc28aQ8CEI3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc28aQ8CEI3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc28aQ8CEI3 Cap2-205ENSMUST00000225824 1634 ntBASIC20.89■□□□□ 0.93
Ccdc28aQ8CEI3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc28aQ8CEI3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc28aQ8CEI3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc28aQ8CEI3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc28aQ8CEI3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc28aQ8CEI3 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.88■□□□□ 0.93
Ccdc28aQ8CEI3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc28aQ8CEI3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc28aQ8CEI3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc28aQ8CEI3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc28aQ8CEI3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc28aQ8CEI3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc28aQ8CEI3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Ccdc28aQ8CEI3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc28aQ8CEI3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc28aQ8CEI3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc28aQ8CEI3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc28aQ8CEI3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc28aQ8CEI3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc28aQ8CEI3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.86■□□□□ 0.93
Ccdc28aQ8CEI3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc28aQ8CEI3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.85■□□□□ 0.93
Ccdc28aQ8CEI3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28aQ8CEI3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28aQ8CEI3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28aQ8CEI3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28aQ8CEI3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28aQ8CEI3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28aQ8CEI3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28aQ8CEI3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28aQ8CEI3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc28aQ8CEI3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc28aQ8CEI3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc28aQ8CEI3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc28aQ8CEI3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc28aQ8CEI3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc28aQ8CEI3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc28aQ8CEI3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.83■□□□□ 0.93
Ccdc28aQ8CEI3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc28aQ8CEI3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.83■□□□□ 0.92
Ccdc28aQ8CEI3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc28aQ8CEI3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc28aQ8CEI3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc28aQ8CEI3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28aQ8CEI3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Ccdc28aQ8CEI3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28aQ8CEI3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28aQ8CEI3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28aQ8CEI3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28aQ8CEI3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28aQ8CEI3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28aQ8CEI3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc28aQ8CEI3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28aQ8CEI3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28aQ8CEI3 Mir6236-201ENSMUST00000184437 123 ntBASIC20.81■□□□□ 0.92
Ccdc28aQ8CEI3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28aQ8CEI3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28aQ8CEI3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ccdc28aQ8CEI3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc28aQ8CEI3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc28aQ8CEI3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc28aQ8CEI3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc28aQ8CEI3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc28aQ8CEI3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc28aQ8CEI3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ccdc28aQ8CEI3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc28aQ8CEI3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc28aQ8CEI3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc28aQ8CEI3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc28aQ8CEI3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.79■□□□□ 0.92
Ccdc28aQ8CEI3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc28aQ8CEI3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc28aQ8CEI3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc28aQ8CEI3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc28aQ8CEI3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc28aQ8CEI3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28aQ8CEI3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28aQ8CEI3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28aQ8CEI3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28aQ8CEI3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.78■□□□□ 0.92
Ccdc28aQ8CEI3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc28aQ8CEI3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc28aQ8CEI3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms