Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.83■□□□□ 0.76
Pcdhb7Q8CDY9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb7Q8CDY9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb7Q8CDY9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb7Q8CDY9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb7Q8CDY9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb7Q8CDY9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb7Q8CDY9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb7Q8CDY9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdhb7Q8CDY9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb7Q8CDY9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb7Q8CDY9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb7Q8CDY9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhb7Q8CDY9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb7Q8CDY9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb7Q8CDY9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb7Q8CDY9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb7Q8CDY9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhb7Q8CDY9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb7Q8CDY9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb7Q8CDY9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb7Q8CDY9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb7Q8CDY9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdhb7Q8CDY9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb7Q8CDY9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb7Q8CDY9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.76■□□□□ 0.75
Pcdhb7Q8CDY9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb7Q8CDY9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb7Q8CDY9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb7Q8CDY9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb7Q8CDY9 Gm43530-201ENSMUST00000195920 274 ntBASIC19.75■□□□□ 0.75
Pcdhb7Q8CDY9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb7Q8CDY9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb7Q8CDY9 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.75■□□□□ 0.75
Pcdhb7Q8CDY9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms