Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtp1Q8C8C1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtp1Q8C8C1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.86■■□□□ 1.25
Rtp1Q8C8C1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtp1Q8C8C1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rtp1Q8C8C1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rtp1Q8C8C1 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.86■■□□□ 1.25
Rtp1Q8C8C1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Rtp1Q8C8C1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rtp1Q8C8C1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtp1Q8C8C1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.85■■□□□ 1.25
Rtp1Q8C8C1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtp1Q8C8C1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Rtp1Q8C8C1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Rtp1Q8C8C1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtp1Q8C8C1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtp1Q8C8C1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtp1Q8C8C1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtp1Q8C8C1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Rtp1Q8C8C1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Rtp1Q8C8C1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rtp1Q8C8C1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rtp1Q8C8C1 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.83■■□□□ 1.25
Rtp1Q8C8C1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Rtp1Q8C8C1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Rtp1Q8C8C1 Gm27801-201ENSMUST00000184174 223 ntBASIC22.83■■□□□ 1.25
Rtp1Q8C8C1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Rtp1Q8C8C1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Rtp1Q8C8C1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rtp1Q8C8C1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rtp1Q8C8C1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Rtp1Q8C8C1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Gm13168-201ENSMUST00000121771 632 ntBASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.81■■□□□ 1.24
Rtp1Q8C8C1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtp1Q8C8C1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtp1Q8C8C1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtp1Q8C8C1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.8■■□□□ 1.24
Rtp1Q8C8C1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Rtp1Q8C8C1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtp1Q8C8C1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtp1Q8C8C1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtp1Q8C8C1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Rtp1Q8C8C1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rtp1Q8C8C1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
Rtp1Q8C8C1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
Rtp1Q8C8C1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.79■■□□□ 1.24
Rtp1Q8C8C1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Rtp1Q8C8C1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Rtp1Q8C8C1 Gm7977-201ENSMUST00000193787 748 ntBASIC22.79■■□□□ 1.24
Rtp1Q8C8C1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rtp1Q8C8C1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Rtp1Q8C8C1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rtp1Q8C8C1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rtp1Q8C8C1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rtp1Q8C8C1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rtp1Q8C8C1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.78■■□□□ 1.24
Rtp1Q8C8C1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rtp1Q8C8C1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rtp1Q8C8C1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rtp1Q8C8C1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rtp1Q8C8C1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 Gm43859-201ENSMUST00000200075 1412 ntBASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp1Q8C8C1 Gm13148-201ENSMUST00000118892 745 ntBASIC22.76■■□□□ 1.23
Rtp1Q8C8C1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.76■■□□□ 1.23
Rtp1Q8C8C1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.76■■□□□ 1.23
Rtp1Q8C8C1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.76■■□□□ 1.23
Rtp1Q8C8C1 Gm5408-201ENSMUST00000197998 747 ntBASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms