Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Cps1Q8C196 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cps1Q8C196 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Cps1Q8C196 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cps1Q8C196 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cps1Q8C196 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Cps1Q8C196 Gm12527-201ENSMUST00000117967 564 ntBASIC27.26■■□□□ 1.96
Cps1Q8C196 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
Cps1Q8C196 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
Cps1Q8C196 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cps1Q8C196 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC27.26■■□□□ 1.95
Cps1Q8C196 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Cps1Q8C196 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cps1Q8C196 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC27.26■■□□□ 1.95
Cps1Q8C196 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Cps1Q8C196 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Cps1Q8C196 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC27.26■■□□□ 1.95
Cps1Q8C196 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Cps1Q8C196 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
Cps1Q8C196 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC27.25■■□□□ 1.95
Cps1Q8C196 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC27.25■■□□□ 1.95
Cps1Q8C196 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
Cps1Q8C196 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Cps1Q8C196 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Cps1Q8C196 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Cps1Q8C196 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Cps1Q8C196 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cps1Q8C196 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Cps1Q8C196 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cps1Q8C196 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cps1Q8C196 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC27.23■■□□□ 1.95
Cps1Q8C196 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cps1Q8C196 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cps1Q8C196 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Cps1Q8C196 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Cps1Q8C196 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Cps1Q8C196 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cps1Q8C196 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC27.21■■□□□ 1.95
Cps1Q8C196 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cps1Q8C196 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cps1Q8C196 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC27.2■■□□□ 1.95
Cps1Q8C196 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC27.2■■□□□ 1.95
Cps1Q8C196 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
Cps1Q8C196 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC27.2■■□□□ 1.94
Cps1Q8C196 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Cps1Q8C196 Gm38205-201ENSMUST00000192243 258 ntBASIC27.2■■□□□ 1.94
Cps1Q8C196 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cps1Q8C196 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cps1Q8C196 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Cps1Q8C196 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cps1Q8C196 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cps1Q8C196 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cps1Q8C196 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cps1Q8C196 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Cps1Q8C196 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC27.18■■□□□ 1.94
Cps1Q8C196 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cps1Q8C196 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC27.17■■□□□ 1.94
Cps1Q8C196 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cps1Q8C196 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cps1Q8C196 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cps1Q8C196 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cps1Q8C196 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cps1Q8C196 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC27.16■■□□□ 1.94
Cps1Q8C196 Gm20760-201ENSMUST00000179197 648 ntBASIC27.16■■□□□ 1.94
Cps1Q8C196 Gm26524-201ENSMUST00000192339 390 ntBASIC27.16■■□□□ 1.94
Cps1Q8C196 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cps1Q8C196 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cps1Q8C196 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Cps1Q8C196 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Cps1Q8C196 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cps1Q8C196 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC27.15■■□□□ 1.94
Cps1Q8C196 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cps1Q8C196 Gm10655-201ENSMUST00000098658 1397 ntBASIC27.15■■□□□ 1.94
Cps1Q8C196 Gm6211-202ENSMUST00000167849 925 ntBASIC27.15■■□□□ 1.94
Cps1Q8C196 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cps1Q8C196 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cps1Q8C196 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cps1Q8C196 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cps1Q8C196 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cps1Q8C196 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cps1Q8C196 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cps1Q8C196 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
Cps1Q8C196 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC27.14■■□□□ 1.94
Cps1Q8C196 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC27.14■■□□□ 1.94
Cps1Q8C196 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cps1Q8C196 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cps1Q8C196 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Cps1Q8C196 Gm7290-201ENSMUST00000104990 617 ntBASIC27.13■■□□□ 1.93
Cps1Q8C196 Gm12918-201ENSMUST00000120234 636 ntBASIC27.13■■□□□ 1.93
Cps1Q8C196 Gm15710-201ENSMUST00000121821 636 ntBASIC27.13■■□□□ 1.93
Cps1Q8C196 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
Cps1Q8C196 Gm5075-201ENSMUST00000196916 622 ntBASIC27.13■■□□□ 1.93
Cps1Q8C196 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Cps1Q8C196 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Cps1Q8C196 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cps1Q8C196 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Cps1Q8C196 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC27.13■■□□□ 1.93
Cps1Q8C196 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC27.13■■□□□ 1.93
Cps1Q8C196 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Cps1Q8C196 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms