Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim35Q8C006 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim35Q8C006 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim35Q8C006 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim35Q8C006 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim35Q8C006 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim35Q8C006 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
Trim35Q8C006 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim35Q8C006 Gm43553-201ENSMUST00000200900 685 ntBASIC20.06■□□□□ 0.8
Trim35Q8C006 Thoc7-209ENSMUST00000225325 765 ntBASIC20.06■□□□□ 0.8
Trim35Q8C006 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim35Q8C006 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim35Q8C006 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim35Q8C006 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim35Q8C006 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim35Q8C006 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim35Q8C006 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim35Q8C006 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim35Q8C006 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.05■□□□□ 0.8
Trim35Q8C006 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim35Q8C006 Gm21956-201ENSMUST00000179946 522 ntBASIC20.05■□□□□ 0.8
Trim35Q8C006 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim35Q8C006 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim35Q8C006 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.05■□□□□ 0.8
Trim35Q8C006 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim35Q8C006 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim35Q8C006 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim35Q8C006 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim35Q8C006 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim35Q8C006 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim35Q8C006 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim35Q8C006 Golgb1-201ENSMUST00000023534 498 ntBASIC20.04■□□□□ 0.8
Trim35Q8C006 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Trim35Q8C006 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim35Q8C006 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim35Q8C006 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim35Q8C006 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim35Q8C006 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trim35Q8C006 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim35Q8C006 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim35Q8C006 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trim35Q8C006 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim35Q8C006 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim35Q8C006 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim35Q8C006 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim35Q8C006 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim35Q8C006 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim35Q8C006 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.02■□□□□ 0.8
Trim35Q8C006 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trim35Q8C006 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.02■□□□□ 0.8
Trim35Q8C006 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim35Q8C006 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Trim35Q8C006 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim35Q8C006 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim35Q8C006 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim35Q8C006 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim35Q8C006 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Trim35Q8C006 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim35Q8C006 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim35Q8C006 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim35Q8C006 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim35Q8C006 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim35Q8C006 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim35Q8C006 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim35Q8C006 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.01■□□□□ 0.79
Trim35Q8C006 Gm9870-201ENSMUST00000063874 645 ntBASIC20.01■□□□□ 0.79
Trim35Q8C006 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim35Q8C006 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim35Q8C006 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim35Q8C006 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trim35Q8C006 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trim35Q8C006 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20■□□□□ 0.79
Trim35Q8C006 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim35Q8C006 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim35Q8C006 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim35Q8C006 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim35Q8C006 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim35Q8C006 AC153937.1-201ENSMUST00000218734 412 ntBASIC20■□□□□ 0.79
Trim35Q8C006 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim35Q8C006 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim35Q8C006 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim35Q8C006 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim35Q8C006 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim35Q8C006 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim35Q8C006 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim35Q8C006 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim35Q8C006 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim35Q8C006 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms