Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Lsm11Q8BUV6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lsm11Q8BUV6 Golph3-205ENSMUST00000228671 2842 ntBASIC16.83■□□□□ 0.29
Lsm11Q8BUV6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lsm11Q8BUV6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 Gm45444-201ENSMUST00000211394 898 ntBASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm11Q8BUV6 Cap2-205ENSMUST00000225824 1634 ntBASIC16.81■□□□□ 0.28
Lsm11Q8BUV6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.81■□□□□ 0.28
Lsm11Q8BUV6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm11Q8BUV6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm11Q8BUV6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm11Q8BUV6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.81■□□□□ 0.28
Lsm11Q8BUV6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm11Q8BUV6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm11Q8BUV6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Lsm11Q8BUV6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm11Q8BUV6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm11Q8BUV6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm11Q8BUV6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm11Q8BUV6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.79■□□□□ 0.28
Lsm11Q8BUV6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm11Q8BUV6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm11Q8BUV6 Gm13238-201ENSMUST00000117655 780 ntBASIC16.79■□□□□ 0.28
Lsm11Q8BUV6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm11Q8BUV6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lsm11Q8BUV6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm11Q8BUV6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm11Q8BUV6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.78■□□□□ 0.28
Lsm11Q8BUV6 Gm44487-201ENSMUST00000205145 325 ntBASIC16.78■□□□□ 0.28
Lsm11Q8BUV6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm11Q8BUV6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm11Q8BUV6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm11Q8BUV6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lsm11Q8BUV6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm11Q8BUV6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm11Q8BUV6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm11Q8BUV6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm11Q8BUV6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm11Q8BUV6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm11Q8BUV6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm11Q8BUV6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms