Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Fam43aQ8BUP8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Fam43aQ8BUP8 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.85■■□□□ 1.09
Fam43aQ8BUP8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Fam43aQ8BUP8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Fam43aQ8BUP8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Fam43aQ8BUP8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Fam43aQ8BUP8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Fam43aQ8BUP8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.84■■□□□ 1.09
Fam43aQ8BUP8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Fam43aQ8BUP8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Fam43aQ8BUP8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.84■■□□□ 1.09
Fam43aQ8BUP8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Fam43aQ8BUP8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Fam43aQ8BUP8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Fam43aQ8BUP8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Fam43aQ8BUP8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Fam43aQ8BUP8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Fam43aQ8BUP8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Fam43aQ8BUP8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Fam43aQ8BUP8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Fam43aQ8BUP8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Fam43aQ8BUP8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Fam43aQ8BUP8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Fam43aQ8BUP8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Fam43aQ8BUP8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Fam43aQ8BUP8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.82■■□□□ 1.08
Fam43aQ8BUP8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Fam43aQ8BUP8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Fam43aQ8BUP8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Fam43aQ8BUP8 Rps24-207ENSMUST00000224568 714 ntBASIC21.82■■□□□ 1.08
Fam43aQ8BUP8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Fam43aQ8BUP8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Fam43aQ8BUP8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Fam43aQ8BUP8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Fam43aQ8BUP8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Fam43aQ8BUP8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Fam43aQ8BUP8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Fam43aQ8BUP8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Fam43aQ8BUP8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Fam43aQ8BUP8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Fam43aQ8BUP8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Fam43aQ8BUP8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Fam43aQ8BUP8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Fam43aQ8BUP8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Fam43aQ8BUP8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Fam43aQ8BUP8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Fam43aQ8BUP8 Gm45102-201ENSMUST00000207427 857 ntBASIC21.79■■□□□ 1.08
Fam43aQ8BUP8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC21.79■■□□□ 1.08
Fam43aQ8BUP8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Fam43aQ8BUP8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Fam43aQ8BUP8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.79■■□□□ 1.08
Fam43aQ8BUP8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Fam43aQ8BUP8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Fam43aQ8BUP8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Fam43aQ8BUP8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Fam43aQ8BUP8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Fam43aQ8BUP8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Fam43aQ8BUP8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Fam43aQ8BUP8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Fam43aQ8BUP8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Fam43aQ8BUP8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Fam43aQ8BUP8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.77■■□□□ 1.08
Fam43aQ8BUP8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.77■■□□□ 1.08
Fam43aQ8BUP8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Fam43aQ8BUP8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Fam43aQ8BUP8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Fam43aQ8BUP8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Fam43aQ8BUP8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Fam43aQ8BUP8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Fam43aQ8BUP8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Fam43aQ8BUP8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Fam43aQ8BUP8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Fam43aQ8BUP8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.76■■□□□ 1.07
Fam43aQ8BUP8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 Gm7417-201ENSMUST00000192950 473 ntBASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Fam43aQ8BUP8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms