Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptpn7Q8BUM3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptpn7Q8BUM3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptpn7Q8BUM3 Gm15820-201ENSMUST00000201566 728 ntBASIC18.51■□□□□ 0.55
Ptpn7Q8BUM3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptpn7Q8BUM3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ptpn7Q8BUM3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptpn7Q8BUM3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptpn7Q8BUM3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ptpn7Q8BUM3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptpn7Q8BUM3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptpn7Q8BUM3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.49■□□□□ 0.55
Ptpn7Q8BUM3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptpn7Q8BUM3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptpn7Q8BUM3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ptpn7Q8BUM3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Ptpn7Q8BUM3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptpn7Q8BUM3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ptpn7Q8BUM3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptpn7Q8BUM3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptpn7Q8BUM3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptpn7Q8BUM3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ptpn7Q8BUM3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.48■□□□□ 0.55
Ptpn7Q8BUM3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ptpn7Q8BUM3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptpn7Q8BUM3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ptpn7Q8BUM3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ptpn7Q8BUM3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ptpn7Q8BUM3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Ptpn7Q8BUM3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ptpn7Q8BUM3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ptpn7Q8BUM3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ptpn7Q8BUM3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptpn7Q8BUM3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptpn7Q8BUM3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ptpn7Q8BUM3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.45■□□□□ 0.54
Ptpn7Q8BUM3 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.45■□□□□ 0.54
Ptpn7Q8BUM3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ptpn7Q8BUM3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.45■□□□□ 0.54
Ptpn7Q8BUM3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ptpn7Q8BUM3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptpn7Q8BUM3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ptpn7Q8BUM3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Ptpn7Q8BUM3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ptpn7Q8BUM3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.44■□□□□ 0.54
Ptpn7Q8BUM3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.44■□□□□ 0.54
Ptpn7Q8BUM3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ptpn7Q8BUM3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.44■□□□□ 0.54
Ptpn7Q8BUM3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ptpn7Q8BUM3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.44■□□□□ 0.54
Ptpn7Q8BUM3 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.43■□□□□ 0.54
Ptpn7Q8BUM3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ptpn7Q8BUM3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms