Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpne3Q8BT60 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.09■□□□□ 0.65
Cpne3Q8BT60 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpne3Q8BT60 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cpne3Q8BT60 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpne3Q8BT60 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpne3Q8BT60 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.08■□□□□ 0.64
Cpne3Q8BT60 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.08■□□□□ 0.64
Cpne3Q8BT60 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cpne3Q8BT60 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpne3Q8BT60 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cpne3Q8BT60 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpne3Q8BT60 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne3Q8BT60 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne3Q8BT60 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne3Q8BT60 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne3Q8BT60 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne3Q8BT60 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cpne3Q8BT60 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne3Q8BT60 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne3Q8BT60 Etf1-202ENSMUST00000180351 108 ntBASIC19.07■□□□□ 0.64
Cpne3Q8BT60 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne3Q8BT60 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne3Q8BT60 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpne3Q8BT60 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.07■□□□□ 0.64
Cpne3Q8BT60 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne3Q8BT60 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne3Q8BT60 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne3Q8BT60 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne3Q8BT60 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cpne3Q8BT60 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.06■□□□□ 0.64
Cpne3Q8BT60 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne3Q8BT60 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne3Q8BT60 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne3Q8BT60 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpne3Q8BT60 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne3Q8BT60 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne3Q8BT60 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cpne3Q8BT60 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne3Q8BT60 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne3Q8BT60 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne3Q8BT60 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne3Q8BT60 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne3Q8BT60 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cpne3Q8BT60 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpne3Q8BT60 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Gm9870-201ENSMUST00000063874 645 ntBASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Cpne3Q8BT60 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne3Q8BT60 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.02■□□□□ 0.64
Cpne3Q8BT60 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpne3Q8BT60 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Cpne3Q8BT60 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpne3Q8BT60 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne3Q8BT60 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne3Q8BT60 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne3Q8BT60 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne3Q8BT60 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne3Q8BT60 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne3Q8BT60 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne3Q8BT60 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpne3Q8BT60 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
Cpne3Q8BT60 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne3Q8BT60 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne3Q8BT60 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne3Q8BT60 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne3Q8BT60 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpne3Q8BT60 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Cpne3Q8BT60 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne3Q8BT60 Golph3-202ENSMUST00000226517 2359 ntBASIC18.99■□□□□ 0.63
Cpne3Q8BT60 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne3Q8BT60 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne3Q8BT60 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpne3Q8BT60 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.99■□□□□ 0.63
Cpne3Q8BT60 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Cpne3Q8BT60 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cpne3Q8BT60 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms