Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4Q8BQZ5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Gm7143-201ENSMUST00000222811 859 ntBASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4Q8BQZ5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.15■□□□□ 0.66
Cpsf4Q8BQZ5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf4Q8BQZ5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf4Q8BQZ5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf4Q8BQZ5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf4Q8BQZ5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.15■□□□□ 0.66
Cpsf4Q8BQZ5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cpsf4Q8BQZ5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.15■□□□□ 0.66
Cpsf4Q8BQZ5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf4Q8BQZ5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf4Q8BQZ5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf4Q8BQZ5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf4Q8BQZ5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf4Q8BQZ5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf4Q8BQZ5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Cpsf4Q8BQZ5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cpsf4Q8BQZ5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf4Q8BQZ5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf4Q8BQZ5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf4Q8BQZ5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cpsf4Q8BQZ5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Cpsf4Q8BQZ5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf4Q8BQZ5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
Cpsf4Q8BQZ5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cpsf4Q8BQZ5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf4Q8BQZ5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.12■□□□□ 0.65
Cpsf4Q8BQZ5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf4Q8BQZ5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf4Q8BQZ5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cpsf4Q8BQZ5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cpsf4Q8BQZ5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.12■□□□□ 0.65
Cpsf4Q8BQZ5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf4Q8BQZ5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.11■□□□□ 0.65
Cpsf4Q8BQZ5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf4Q8BQZ5 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.11■□□□□ 0.65
Cpsf4Q8BQZ5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cpsf4Q8BQZ5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cpsf4Q8BQZ5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4Q8BQZ5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4Q8BQZ5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4Q8BQZ5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Cpsf4Q8BQZ5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.1■□□□□ 0.65
Cpsf4Q8BQZ5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.1■□□□□ 0.65
Cpsf4Q8BQZ5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4Q8BQZ5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4Q8BQZ5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cpsf4Q8BQZ5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cpsf4Q8BQZ5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cpsf4Q8BQZ5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Cpsf4Q8BQZ5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
Cpsf4Q8BQZ5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf4Q8BQZ5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf4Q8BQZ5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Cpsf4Q8BQZ5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cpsf4Q8BQZ5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms