Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab11fip4Q8BQP8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab11fip4Q8BQP8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab11fip4Q8BQP8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rab11fip4Q8BQP8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab11fip4Q8BQP8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.91■■□□□ 1.1
Rab11fip4Q8BQP8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rab11fip4Q8BQP8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.91■■□□□ 1.1
Rab11fip4Q8BQP8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab11fip4Q8BQP8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rab11fip4Q8BQP8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Rab11fip4Q8BQP8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Rab11fip4Q8BQP8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rab11fip4Q8BQP8 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.89■■□□□ 1.09
Rab11fip4Q8BQP8 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.89■■□□□ 1.09
Rab11fip4Q8BQP8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rab11fip4Q8BQP8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rab11fip4Q8BQP8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rab11fip4Q8BQP8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Notumos-201ENSMUST00000151998 2659 ntBASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rab11fip4Q8BQP8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rab11fip4Q8BQP8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rab11fip4Q8BQP8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rab11fip4Q8BQP8 Mir7075-201ENSMUST00000184187 82 ntBASIC21.87■■□□□ 1.09
Rab11fip4Q8BQP8 Gm6139-201ENSMUST00000079261 882 ntBASIC21.87■■□□□ 1.09
Rab11fip4Q8BQP8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rab11fip4Q8BQP8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rab11fip4Q8BQP8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab11fip4Q8BQP8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rab11fip4Q8BQP8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rab11fip4Q8BQP8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.85■■□□□ 1.09
Rab11fip4Q8BQP8 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.85■■□□□ 1.09
Rab11fip4Q8BQP8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rab11fip4Q8BQP8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rab11fip4Q8BQP8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rab11fip4Q8BQP8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rab11fip4Q8BQP8 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rab11fip4Q8BQP8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rab11fip4Q8BQP8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rab11fip4Q8BQP8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.83■■□□□ 1.09
Rab11fip4Q8BQP8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Rab11fip4Q8BQP8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.83■■□□□ 1.09
Rab11fip4Q8BQP8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rab11fip4Q8BQP8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rab11fip4Q8BQP8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Rab11fip4Q8BQP8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rab11fip4Q8BQP8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rab11fip4Q8BQP8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rab11fip4Q8BQP8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rab11fip4Q8BQP8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rab11fip4Q8BQP8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rab11fip4Q8BQP8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rab11fip4Q8BQP8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rab11fip4Q8BQP8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rab11fip4Q8BQP8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rab11fip4Q8BQP8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms