Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sfr1Q8BP27 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Sfr1Q8BP27 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Sfr1Q8BP27 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sfr1Q8BP27 Gm45417-201ENSMUST00000209533 758 ntBASIC20.07■□□□□ 0.8
Sfr1Q8BP27 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sfr1Q8BP27 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sfr1Q8BP27 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sfr1Q8BP27 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Sfr1Q8BP27 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sfr1Q8BP27 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.07■□□□□ 0.8
Sfr1Q8BP27 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sfr1Q8BP27 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sfr1Q8BP27 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sfr1Q8BP27 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sfr1Q8BP27 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sfr1Q8BP27 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Sfr1Q8BP27 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sfr1Q8BP27 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sfr1Q8BP27 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sfr1Q8BP27 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sfr1Q8BP27 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Sfr1Q8BP27 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sfr1Q8BP27 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sfr1Q8BP27 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sfr1Q8BP27 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sfr1Q8BP27 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sfr1Q8BP27 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sfr1Q8BP27 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sfr1Q8BP27 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Sfr1Q8BP27 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Mir7075-201ENSMUST00000184187 82 ntBASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sfr1Q8BP27 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Sfr1Q8BP27 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sfr1Q8BP27 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.02■□□□□ 0.79
Sfr1Q8BP27 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.02■□□□□ 0.79
Sfr1Q8BP27 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sfr1Q8BP27 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.01■□□□□ 0.79
Sfr1Q8BP27 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sfr1Q8BP27 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sfr1Q8BP27 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Sfr1Q8BP27 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sfr1Q8BP27 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Sfr1Q8BP27 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.01■□□□□ 0.79
Sfr1Q8BP27 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sfr1Q8BP27 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Sfr1Q8BP27 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20■□□□□ 0.79
Sfr1Q8BP27 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20■□□□□ 0.79
Sfr1Q8BP27 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sfr1Q8BP27 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20■□□□□ 0.79
Sfr1Q8BP27 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sfr1Q8BP27 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sfr1Q8BP27 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sfr1Q8BP27 Spcs1-204ENSMUST00000226782 949 ntBASIC19.99■□□□□ 0.79
Sfr1Q8BP27 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sfr1Q8BP27 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sfr1Q8BP27 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sfr1Q8BP27 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sfr1Q8BP27 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms