Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Ckap4Q8BMK4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ckap4Q8BMK4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap4Q8BMK4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 Etf1-202ENSMUST00000180351 108 ntBASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap4Q8BMK4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap4Q8BMK4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap4Q8BMK4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap4Q8BMK4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.67■□□□□ 0.58
Ckap4Q8BMK4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap4Q8BMK4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ckap4Q8BMK4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap4Q8BMK4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap4Q8BMK4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap4Q8BMK4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.67■□□□□ 0.58
Ckap4Q8BMK4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap4Q8BMK4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ckap4Q8BMK4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.66■□□□□ 0.58
Ckap4Q8BMK4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.66■□□□□ 0.58
Ckap4Q8BMK4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap4Q8BMK4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ckap4Q8BMK4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap4Q8BMK4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap4Q8BMK4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap4Q8BMK4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap4Q8BMK4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap4Q8BMK4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ckap4Q8BMK4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap4Q8BMK4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap4Q8BMK4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap4Q8BMK4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ckap4Q8BMK4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap4Q8BMK4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ckap4Q8BMK4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap4Q8BMK4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ckap4Q8BMK4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap4Q8BMK4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap4Q8BMK4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap4Q8BMK4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ckap4Q8BMK4 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.62■□□□□ 0.57
Ckap4Q8BMK4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap4Q8BMK4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap4Q8BMK4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.62■□□□□ 0.57
Ckap4Q8BMK4 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.62■□□□□ 0.57
Ckap4Q8BMK4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap4Q8BMK4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.62■□□□□ 0.57
Ckap4Q8BMK4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap4Q8BMK4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap4Q8BMK4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ckap4Q8BMK4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Rps24-207ENSMUST00000224568 714 ntBASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ckap4Q8BMK4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ckap4Q8BMK4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ckap4Q8BMK4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms