Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tdp1Q8BJ37 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tdp1Q8BJ37 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Tdp1Q8BJ37 Gm10602-201ENSMUST00000098239 609 ntBASIC22.02■■□□□ 1.12
Tdp1Q8BJ37 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Tdp1Q8BJ37 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.02■■□□□ 1.11
Tdp1Q8BJ37 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Tdp1Q8BJ37 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Tdp1Q8BJ37 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tdp1Q8BJ37 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tdp1Q8BJ37 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Tdp1Q8BJ37 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tdp1Q8BJ37 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Tdp1Q8BJ37 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Tdp1Q8BJ37 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Tdp1Q8BJ37 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Tdp1Q8BJ37 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tdp1Q8BJ37 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22■■□□□ 1.11
Tdp1Q8BJ37 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22■■□□□ 1.11
Tdp1Q8BJ37 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tdp1Q8BJ37 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22■■□□□ 1.11
Tdp1Q8BJ37 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Tdp1Q8BJ37 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Tdp1Q8BJ37 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tdp1Q8BJ37 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Tdp1Q8BJ37 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tdp1Q8BJ37 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Tdp1Q8BJ37 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tdp1Q8BJ37 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tdp1Q8BJ37 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tdp1Q8BJ37 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Tdp1Q8BJ37 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tdp1Q8BJ37 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tdp1Q8BJ37 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tdp1Q8BJ37 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tdp1Q8BJ37 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tdp1Q8BJ37 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tdp1Q8BJ37 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.98■■□□□ 1.11
Tdp1Q8BJ37 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tdp1Q8BJ37 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tdp1Q8BJ37 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tdp1Q8BJ37 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tdp1Q8BJ37 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tdp1Q8BJ37 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tdp1Q8BJ37 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.97■■□□□ 1.11
Tdp1Q8BJ37 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tdp1Q8BJ37 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tdp1Q8BJ37 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tdp1Q8BJ37 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tdp1Q8BJ37 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tdp1Q8BJ37 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tdp1Q8BJ37 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Tdp1Q8BJ37 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tdp1Q8BJ37 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Tdp1Q8BJ37 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.96■■□□□ 1.11
Tdp1Q8BJ37 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Tdp1Q8BJ37 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Tdp1Q8BJ37 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Tdp1Q8BJ37 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.96■■□□□ 1.11
Tdp1Q8BJ37 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.96■■□□□ 1.11
Tdp1Q8BJ37 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.96■■□□□ 1.11
Tdp1Q8BJ37 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tdp1Q8BJ37 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tdp1Q8BJ37 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tdp1Q8BJ37 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tdp1Q8BJ37 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tdp1Q8BJ37 Gm12933-201ENSMUST00000120203 872 ntBASIC21.95■■□□□ 1.1
Tdp1Q8BJ37 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Tdp1Q8BJ37 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tdp1Q8BJ37 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Tdp1Q8BJ37 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tdp1Q8BJ37 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tdp1Q8BJ37 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tdp1Q8BJ37 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tdp1Q8BJ37 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Tdp1Q8BJ37 Gm7514-201ENSMUST00000209475 934 ntBASIC21.94■■□□□ 1.1
Tdp1Q8BJ37 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.94■■□□□ 1.1
Tdp1Q8BJ37 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tdp1Q8BJ37 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tdp1Q8BJ37 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tdp1Q8BJ37 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tdp1Q8BJ37 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tdp1Q8BJ37 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tdp1Q8BJ37 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.93■■□□□ 1.1
Tdp1Q8BJ37 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Tdp1Q8BJ37 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tdp1Q8BJ37 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Tdp1Q8BJ37 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Tdp1Q8BJ37 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tdp1Q8BJ37 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Tdp1Q8BJ37 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Tdp1Q8BJ37 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tdp1Q8BJ37 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Tdp1Q8BJ37 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tdp1Q8BJ37 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tdp1Q8BJ37 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Tdp1Q8BJ37 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.91■■□□□ 1.1
Tdp1Q8BJ37 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.91■■□□□ 1.1
Tdp1Q8BJ37 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tdp1Q8BJ37 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms