Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn3Q8BHH8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn3Q8BHH8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.51■□□□□ 0.55
Clrn3Q8BHH8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn3Q8BHH8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn3Q8BHH8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn3Q8BHH8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Mir6236-201ENSMUST00000184437 123 ntBASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Gm9847-201ENSMUST00000052528 599 ntBASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn3Q8BHH8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn3Q8BHH8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn3Q8BHH8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Clrn3Q8BHH8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn3Q8BHH8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn3Q8BHH8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn3Q8BHH8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.49■□□□□ 0.55
Clrn3Q8BHH8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn3Q8BHH8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.47■□□□□ 0.55
Clrn3Q8BHH8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn3Q8BHH8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn3Q8BHH8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn3Q8BHH8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Clrn3Q8BHH8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Clrn3Q8BHH8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn3Q8BHH8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.46■□□□□ 0.55
Clrn3Q8BHH8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn3Q8BHH8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn3Q8BHH8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn3Q8BHH8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn3Q8BHH8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn3Q8BHH8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn3Q8BHH8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn3Q8BHH8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Clrn3Q8BHH8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn3Q8BHH8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn3Q8BHH8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn3Q8BHH8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.45■□□□□ 0.54
Clrn3Q8BHH8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn3Q8BHH8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.45■□□□□ 0.54
Clrn3Q8BHH8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn3Q8BHH8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn3Q8BHH8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn3Q8BHH8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn3Q8BHH8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn3Q8BHH8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn3Q8BHH8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn3Q8BHH8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn3Q8BHH8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn3Q8BHH8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.44■□□□□ 0.54
Clrn3Q8BHH8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.44■□□□□ 0.54
Clrn3Q8BHH8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn3Q8BHH8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn3Q8BHH8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms