Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rab39aQ8BHD0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab39aQ8BHD0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rab39aQ8BHD0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab39aQ8BHD0 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.2■□□□□ 0.5
Rab39aQ8BHD0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab39aQ8BHD0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rab39aQ8BHD0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rab39aQ8BHD0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rab39aQ8BHD0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab39aQ8BHD0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rab39aQ8BHD0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rab39aQ8BHD0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab39aQ8BHD0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.18■□□□□ 0.5
Rab39aQ8BHD0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab39aQ8BHD0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab39aQ8BHD0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rab39aQ8BHD0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rab39aQ8BHD0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rab39aQ8BHD0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Gm10399-202ENSMUST00000202768 748 ntBASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rab39aQ8BHD0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rab39aQ8BHD0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rab39aQ8BHD0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab39aQ8BHD0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms