Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smndc1Q8BGT7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smndc1Q8BGT7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Gm10232-201ENSMUST00000089221 720 ntBASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Smndc1Q8BGT7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smndc1Q8BGT7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smndc1Q8BGT7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smndc1Q8BGT7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smndc1Q8BGT7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.02■□□□□ 0.64
Smndc1Q8BGT7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.02■□□□□ 0.64
Smndc1Q8BGT7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.02■□□□□ 0.64
Smndc1Q8BGT7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smndc1Q8BGT7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smndc1Q8BGT7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smndc1Q8BGT7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smndc1Q8BGT7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smndc1Q8BGT7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Smndc1Q8BGT7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smndc1Q8BGT7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smndc1Q8BGT7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Smndc1Q8BGT7 Grk6-206ENSMUST00000224995 2971 ntBASIC19.02■□□□□ 0.63
Smndc1Q8BGT7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smndc1Q8BGT7 Golph3-205ENSMUST00000228671 2842 ntBASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Smndc1Q8BGT7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Smndc1Q8BGT7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smndc1Q8BGT7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smndc1Q8BGT7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19■□□□□ 0.63
Smndc1Q8BGT7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smndc1Q8BGT7 Gm5913-201ENSMUST00000119397 1399 ntBASIC19■□□□□ 0.63
Smndc1Q8BGT7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms