Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npas4Q8BGD7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Npas4Q8BGD7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.04■□□□□ 0.96
Npas4Q8BGD7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npas4Q8BGD7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npas4Q8BGD7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Npas4Q8BGD7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Npas4Q8BGD7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Npas4Q8BGD7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Npas4Q8BGD7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Npas4Q8BGD7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Npas4Q8BGD7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Npas4Q8BGD7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Npas4Q8BGD7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Npas4Q8BGD7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Npas4Q8BGD7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Npas4Q8BGD7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.01■□□□□ 0.95
Npas4Q8BGD7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.01■□□□□ 0.95
Npas4Q8BGD7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Npas4Q8BGD7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Npas4Q8BGD7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Npas4Q8BGD7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Npas4Q8BGD7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21■□□□□ 0.95
Npas4Q8BGD7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21■□□□□ 0.95
Npas4Q8BGD7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Npas4Q8BGD7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npas4Q8BGD7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npas4Q8BGD7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npas4Q8BGD7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npas4Q8BGD7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npas4Q8BGD7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Npas4Q8BGD7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.99■□□□□ 0.95
Npas4Q8BGD7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npas4Q8BGD7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Npas4Q8BGD7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.98■□□□□ 0.95
Npas4Q8BGD7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Npas4Q8BGD7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.98■□□□□ 0.95
Npas4Q8BGD7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.98■□□□□ 0.95
Npas4Q8BGD7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Npas4Q8BGD7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Npas4Q8BGD7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Npas4Q8BGD7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Npas4Q8BGD7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Npas4Q8BGD7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npas4Q8BGD7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npas4Q8BGD7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npas4Q8BGD7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npas4Q8BGD7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npas4Q8BGD7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npas4Q8BGD7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npas4Q8BGD7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npas4Q8BGD7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npas4Q8BGD7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Npas4Q8BGD7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.96■□□□□ 0.95
Npas4Q8BGD7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npas4Q8BGD7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Npas4Q8BGD7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.95■□□□□ 0.94
Npas4Q8BGD7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npas4Q8BGD7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Npas4Q8BGD7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npas4Q8BGD7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npas4Q8BGD7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npas4Q8BGD7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npas4Q8BGD7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.94■□□□□ 0.94
Npas4Q8BGD7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npas4Q8BGD7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Npas4Q8BGD7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Npas4Q8BGD7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npas4Q8BGD7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Npas4Q8BGD7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.93■□□□□ 0.94
Npas4Q8BGD7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Mir5133-201ENSMUST00000174955 77 ntBASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npas4Q8BGD7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npas4Q8BGD7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Npas4Q8BGD7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Npas4Q8BGD7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.92■□□□□ 0.94
Npas4Q8BGD7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npas4Q8BGD7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms