Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Upk3bQ80YF6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.74■□□□□ 0.27
Upk3bQ80YF6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.73■□□□□ 0.27
Upk3bQ80YF6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk3bQ80YF6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk3bQ80YF6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk3bQ80YF6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk3bQ80YF6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.73■□□□□ 0.27
Upk3bQ80YF6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.73■□□□□ 0.27
Upk3bQ80YF6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Upk3bQ80YF6 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.73■□□□□ 0.27
Upk3bQ80YF6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Upk3bQ80YF6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Gm7143-201ENSMUST00000222811 859 ntBASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Upk3bQ80YF6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upk3bQ80YF6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Upk3bQ80YF6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Gm43566-201ENSMUST00000196851 808 ntBASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upk3bQ80YF6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upk3bQ80YF6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.68■□□□□ 0.26
Upk3bQ80YF6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bQ80YF6 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.68■□□□□ 0.26
Upk3bQ80YF6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bQ80YF6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bQ80YF6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.68■□□□□ 0.26
Upk3bQ80YF6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bQ80YF6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.68■□□□□ 0.26
Upk3bQ80YF6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.68■□□□□ 0.26
Upk3bQ80YF6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bQ80YF6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upk3bQ80YF6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms