Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Srrm3Q80WV7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Srrm3Q80WV7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Srrm3Q80WV7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Srrm3Q80WV7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Srrm3Q80WV7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Srrm3Q80WV7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Srrm3Q80WV7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Srrm3Q80WV7 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.58■□□□□ 0.89
Srrm3Q80WV7 Gm9847-201ENSMUST00000052528 599 ntBASIC20.58■□□□□ 0.89
Srrm3Q80WV7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Srrm3Q80WV7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Srrm3Q80WV7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Srrm3Q80WV7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.58■□□□□ 0.88
Srrm3Q80WV7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Srrm3Q80WV7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Srrm3Q80WV7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Srrm3Q80WV7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.57■□□□□ 0.88
Srrm3Q80WV7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Srrm3Q80WV7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Srrm3Q80WV7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Srrm3Q80WV7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Srrm3Q80WV7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.57■□□□□ 0.88
Srrm3Q80WV7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Srrm3Q80WV7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Golph3-205ENSMUST00000228671 2842 ntBASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Srrm3Q80WV7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Srrm3Q80WV7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Srrm3Q80WV7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Srrm3Q80WV7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Srrm3Q80WV7 Gm21956-201ENSMUST00000179946 522 ntBASIC20.55■□□□□ 0.88
Srrm3Q80WV7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.55■□□□□ 0.88
Srrm3Q80WV7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Srrm3Q80WV7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Srrm3Q80WV7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Srrm3Q80WV7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm3Q80WV7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm3Q80WV7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm3Q80WV7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm3Q80WV7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm3Q80WV7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Srrm3Q80WV7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm3Q80WV7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm3Q80WV7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm3Q80WV7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Srrm3Q80WV7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm3Q80WV7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm3Q80WV7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm3Q80WV7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.53■□□□□ 0.88
Srrm3Q80WV7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm3Q80WV7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Srrm3Q80WV7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm3Q80WV7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm3Q80WV7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm3Q80WV7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm3Q80WV7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm3Q80WV7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm3Q80WV7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm3Q80WV7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm3Q80WV7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm3Q80WV7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm3Q80WV7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.52■□□□□ 0.88
Srrm3Q80WV7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm3Q80WV7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Srrm3Q80WV7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srrm3Q80WV7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.51■□□□□ 0.87
Srrm3Q80WV7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.51■□□□□ 0.87
Srrm3Q80WV7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Srrm3Q80WV7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srrm3Q80WV7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srrm3Q80WV7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Srrm3Q80WV7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Srrm3Q80WV7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srrm3Q80WV7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srrm3Q80WV7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Srrm3Q80WV7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms