Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prdm4Q80V63 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prdm4Q80V63 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.5■□□□□ 0.87
Prdm4Q80V63 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.5■□□□□ 0.87
Prdm4Q80V63 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm4Q80V63 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.5■□□□□ 0.87
Prdm4Q80V63 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prdm4Q80V63 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prdm4Q80V63 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prdm4Q80V63 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Prdm4Q80V63 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prdm4Q80V63 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prdm4Q80V63 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.49■□□□□ 0.87
Prdm4Q80V63 Gm43566-201ENSMUST00000196851 808 ntBASIC20.49■□□□□ 0.87
Prdm4Q80V63 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prdm4Q80V63 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prdm4Q80V63 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Prdm4Q80V63 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prdm4Q80V63 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prdm4Q80V63 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prdm4Q80V63 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prdm4Q80V63 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Prdm4Q80V63 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prdm4Q80V63 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prdm4Q80V63 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.48■□□□□ 0.87
Prdm4Q80V63 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Prdm4Q80V63 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Prdm4Q80V63 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prdm4Q80V63 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prdm4Q80V63 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prdm4Q80V63 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Prdm4Q80V63 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prdm4Q80V63 Gm15039-201ENSMUST00000118914 875 ntBASIC20.47■□□□□ 0.87
Prdm4Q80V63 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prdm4Q80V63 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prdm4Q80V63 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prdm4Q80V63 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.46■□□□□ 0.87
Prdm4Q80V63 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prdm4Q80V63 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prdm4Q80V63 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prdm4Q80V63 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prdm4Q80V63 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prdm4Q80V63 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prdm4Q80V63 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prdm4Q80V63 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.43■□□□□ 0.86
Prdm4Q80V63 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prdm4Q80V63 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms