Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13bQ80TY5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13bQ80TY5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13bQ80TY5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps13bQ80TY5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13bQ80TY5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps13bQ80TY5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vps13bQ80TY5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps13bQ80TY5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps13bQ80TY5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Trmt13-210ENSMUST00000198454 880 ntBASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13bQ80TY5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13bQ80TY5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13bQ80TY5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.06□□□□□ -0.48
Vps13bQ80TY5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vps13bQ80TY5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC12.06□□□□□ -0.48
Vps13bQ80TY5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13bQ80TY5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.06□□□□□ -0.48
Vps13bQ80TY5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13bQ80TY5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13bQ80TY5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.06□□□□□ -0.48
Vps13bQ80TY5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.05□□□□□ -0.48
Vps13bQ80TY5 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13bQ80TY5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Gm13534-201ENSMUST00000121169 513 ntBASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13bQ80TY5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Gm15565-201ENSMUST00000118890 427 ntBASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Gm7290-201ENSMUST00000104990 617 ntBASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Gm12918-201ENSMUST00000120234 636 ntBASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Gm15710-201ENSMUST00000121821 636 ntBASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Gm5075-201ENSMUST00000196916 622 ntBASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vps13bQ80TY5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13bQ80TY5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vps13bQ80TY5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.02□□□□□ -0.48
Vps13bQ80TY5 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms