Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otub1Q7TQI3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otub1Q7TQI3 Gm14117-201ENSMUST00000122417 843 ntBASIC18.8■□□□□ 0.6
Otub1Q7TQI3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.8■□□□□ 0.6
Otub1Q7TQI3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Otub1Q7TQI3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.8■□□□□ 0.6
Otub1Q7TQI3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otub1Q7TQI3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otub1Q7TQI3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Otub1Q7TQI3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Otub1Q7TQI3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Otub1Q7TQI3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Otub1Q7TQI3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otub1Q7TQI3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otub1Q7TQI3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.78■□□□□ 0.6
Otub1Q7TQI3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Otub1Q7TQI3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.78■□□□□ 0.6
Otub1Q7TQI3 Gm7143-201ENSMUST00000222811 859 ntBASIC18.78■□□□□ 0.6
Otub1Q7TQI3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Otub1Q7TQI3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otub1Q7TQI3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Otub1Q7TQI3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otub1Q7TQI3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Otub1Q7TQI3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otub1Q7TQI3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otub1Q7TQI3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otub1Q7TQI3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.77■□□□□ 0.6
Otub1Q7TQI3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otub1Q7TQI3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otub1Q7TQI3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.77■□□□□ 0.6
Otub1Q7TQI3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Otub1Q7TQI3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Otub1Q7TQI3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Otub1Q7TQI3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Rps24-207ENSMUST00000224568 714 ntBASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.74■□□□□ 0.59
Otub1Q7TQI3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otub1Q7TQI3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otub1Q7TQI3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otub1Q7TQI3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.73■□□□□ 0.59
Otub1Q7TQI3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otub1Q7TQI3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Otub1Q7TQI3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.73■□□□□ 0.59
Otub1Q7TQI3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otub1Q7TQI3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otub1Q7TQI3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Otub1Q7TQI3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Otub1Q7TQI3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Otub1Q7TQI3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms