Protein–RNA interactions for Protein: Q6PFR5

Tra2a, Transformer-2 protein homolog alpha, mousemouse

Known RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2aQ6PFR5 Gm12441-201ENSMUST00000121806 588 ntBASIC19.49■□□□□ 0.71
Tra2aQ6PFR5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tra2aQ6PFR5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tra2aQ6PFR5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 Gm13146-201ENSMUST00000118508 780 ntBASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tra2aQ6PFR5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tra2aQ6PFR5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.47■□□□□ 0.71
Tra2aQ6PFR5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tra2aQ6PFR5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tra2aQ6PFR5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tra2aQ6PFR5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tra2aQ6PFR5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tra2aQ6PFR5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tra2aQ6PFR5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tra2aQ6PFR5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Gm7290-201ENSMUST00000104990 617 ntBASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Gm12918-201ENSMUST00000120234 636 ntBASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Gm15710-201ENSMUST00000121821 636 ntBASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Gm5075-201ENSMUST00000196916 622 ntBASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tra2aQ6PFR5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tra2aQ6PFR5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tra2aQ6PFR5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tra2aQ6PFR5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tra2aQ6PFR5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tra2aQ6PFR5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tra2aQ6PFR5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tra2aQ6PFR5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tra2aQ6PFR5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tra2aQ6PFR5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tra2aQ6PFR5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tra2aQ6PFR5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tra2aQ6PFR5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tra2aQ6PFR5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tra2aQ6PFR5 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.44■□□□□ 0.7
Tra2aQ6PFR5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tra2aQ6PFR5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tra2aQ6PFR5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tra2aQ6PFR5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tra2aQ6PFR5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.43■□□□□ 0.7
Tra2aQ6PFR5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.43■□□□□ 0.7
Tra2aQ6PFR5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.43■□□□□ 0.7
Tra2aQ6PFR5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tra2aQ6PFR5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tra2aQ6PFR5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tra2aQ6PFR5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
Tra2aQ6PFR5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tra2aQ6PFR5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tra2aQ6PFR5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tra2aQ6PFR5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tra2aQ6PFR5 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.41■□□□□ 0.7
Tra2aQ6PFR5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Tra2aQ6PFR5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tra2aQ6PFR5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tra2aQ6PFR5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.41■□□□□ 0.7
Tra2aQ6PFR5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tra2aQ6PFR5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tra2aQ6PFR5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tra2aQ6PFR5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tra2aQ6PFR5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tra2aQ6PFR5 Gm4968-201ENSMUST00000071458 858 ntBASIC19.4■□□□□ 0.7
Tra2aQ6PFR5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tra2aQ6PFR5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tra2aQ6PFR5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tra2aQ6PFR5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.39■□□□□ 0.7
Tra2aQ6PFR5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
Tra2aQ6PFR5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tra2aQ6PFR5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Tra2aQ6PFR5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Tra2aQ6PFR5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tra2aQ6PFR5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms