Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.69■□□□□ 0.58
Rnf220Q6PDX6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf220Q6PDX6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rnf220Q6PDX6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf220Q6PDX6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Gm7332-201ENSMUST00000118351 454 ntBASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf220Q6PDX6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf220Q6PDX6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf220Q6PDX6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf220Q6PDX6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf220Q6PDX6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf220Q6PDX6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf220Q6PDX6 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.63■□□□□ 0.57
Rnf220Q6PDX6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf220Q6PDX6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf220Q6PDX6 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.63■□□□□ 0.57
Rnf220Q6PDX6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rnf220Q6PDX6 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.63■□□□□ 0.57
Rnf220Q6PDX6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf220Q6PDX6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf220Q6PDX6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf220Q6PDX6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms