Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.8■□□□□ 0.92
Shkbp1Q6P7W2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shkbp1Q6P7W2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shkbp1Q6P7W2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Shkbp1Q6P7W2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shkbp1Q6P7W2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shkbp1Q6P7W2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Reep4-203ENSMUST00000226563 1444 ntBASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shkbp1Q6P7W2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shkbp1Q6P7W2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Shkbp1Q6P7W2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.78■□□□□ 0.92
Shkbp1Q6P7W2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shkbp1Q6P7W2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shkbp1Q6P7W2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shkbp1Q6P7W2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shkbp1Q6P7W2 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.78■□□□□ 0.92
Shkbp1Q6P7W2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shkbp1Q6P7W2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shkbp1Q6P7W2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shkbp1Q6P7W2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shkbp1Q6P7W2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shkbp1Q6P7W2 Gm13234-201ENSMUST00000120010 747 ntBASIC20.77■□□□□ 0.92
Shkbp1Q6P7W2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.77■□□□□ 0.92
Shkbp1Q6P7W2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shkbp1Q6P7W2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shkbp1Q6P7W2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shkbp1Q6P7W2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shkbp1Q6P7W2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.76■□□□□ 0.91
Shkbp1Q6P7W2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shkbp1Q6P7W2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shkbp1Q6P7W2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Shkbp1Q6P7W2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shkbp1Q6P7W2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shkbp1Q6P7W2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shkbp1Q6P7W2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shkbp1Q6P7W2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shkbp1Q6P7W2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shkbp1Q6P7W2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shkbp1Q6P7W2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shkbp1Q6P7W2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.74■□□□□ 0.91
Shkbp1Q6P7W2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shkbp1Q6P7W2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Shkbp1Q6P7W2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shkbp1Q6P7W2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Shkbp1Q6P7W2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.73■□□□□ 0.91
Shkbp1Q6P7W2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.73■□□□□ 0.91
Shkbp1Q6P7W2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.73■□□□□ 0.91
Shkbp1Q6P7W2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shkbp1Q6P7W2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Shkbp1Q6P7W2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shkbp1Q6P7W2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shkbp1Q6P7W2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shkbp1Q6P7W2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shkbp1Q6P7W2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shkbp1Q6P7W2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.71■□□□□ 0.91
Shkbp1Q6P7W2 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.71■□□□□ 0.91
Shkbp1Q6P7W2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shkbp1Q6P7W2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shkbp1Q6P7W2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Shkbp1Q6P7W2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shkbp1Q6P7W2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shkbp1Q6P7W2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Shkbp1Q6P7W2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Shkbp1Q6P7W2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shkbp1Q6P7W2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Shkbp1Q6P7W2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shkbp1Q6P7W2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.7■□□□□ 0.9
Shkbp1Q6P7W2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shkbp1Q6P7W2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shkbp1Q6P7W2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shkbp1Q6P7W2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shkbp1Q6P7W2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Shkbp1Q6P7W2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms