Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc4Q6P2L7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Casc4Q6P2L7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc4Q6P2L7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc4Q6P2L7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Casc4Q6P2L7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20■□□□□ 0.79
Casc4Q6P2L7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc4Q6P2L7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Casc4Q6P2L7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Casc4Q6P2L7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20■□□□□ 0.79
Casc4Q6P2L7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Casc4Q6P2L7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20■□□□□ 0.79
Casc4Q6P2L7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20■□□□□ 0.79
Casc4Q6P2L7 Appbp2os-202ENSMUST00000206972 447 ntBASIC20■□□□□ 0.79
Casc4Q6P2L7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20■□□□□ 0.79
Casc4Q6P2L7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20■□□□□ 0.79
Casc4Q6P2L7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc4Q6P2L7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20■□□□□ 0.79
Casc4Q6P2L7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc4Q6P2L7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Casc4Q6P2L7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Casc4Q6P2L7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Casc4Q6P2L7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc4Q6P2L7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc4Q6P2L7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc4Q6P2L7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc4Q6P2L7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Casc4Q6P2L7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc4Q6P2L7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.99■□□□□ 0.79
Casc4Q6P2L7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.99■□□□□ 0.79
Casc4Q6P2L7 Gm43137-201ENSMUST00000198052 594 ntBASIC19.99■□□□□ 0.79
Casc4Q6P2L7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Casc4Q6P2L7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casc4Q6P2L7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Casc4Q6P2L7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Casc4Q6P2L7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.98■□□□□ 0.79
Casc4Q6P2L7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Casc4Q6P2L7 Mir6236-201ENSMUST00000184437 123 ntBASIC19.98■□□□□ 0.79
Casc4Q6P2L7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Casc4Q6P2L7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Casc4Q6P2L7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Casc4Q6P2L7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Casc4Q6P2L7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Gm27454-201ENSMUST00000185090 204 ntBASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Casc4Q6P2L7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc4Q6P2L7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.96■□□□□ 0.79
Casc4Q6P2L7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc4Q6P2L7 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.96■□□□□ 0.79
Casc4Q6P2L7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc4Q6P2L7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Casc4Q6P2L7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Casc4Q6P2L7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.96■□□□□ 0.79
Casc4Q6P2L7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Casc4Q6P2L7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Casc4Q6P2L7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Casc4Q6P2L7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc4Q6P2L7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc4Q6P2L7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Casc4Q6P2L7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Casc4Q6P2L7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.94■□□□□ 0.78
Casc4Q6P2L7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc4Q6P2L7 Gm45417-201ENSMUST00000209533 758 ntBASIC19.94■□□□□ 0.78
Casc4Q6P2L7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc4Q6P2L7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Casc4Q6P2L7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.94■□□□□ 0.78
Casc4Q6P2L7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Casc4Q6P2L7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms