Protein–RNA interactions for Protein: Q6IQX7

Chpf, Chondroitin sulfate synthase 2, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChpfQ6IQX7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ChpfQ6IQX7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.32■■□□□ 1
ChpfQ6IQX7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.32■■□□□ 1
ChpfQ6IQX7 Gm27801-201ENSMUST00000184174 223 ntBASIC21.32■■□□□ 1
ChpfQ6IQX7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ChpfQ6IQX7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.32■■□□□ 1
ChpfQ6IQX7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
ChpfQ6IQX7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ChpfQ6IQX7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ChpfQ6IQX7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ChpfQ6IQX7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ChpfQ6IQX7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.31■■□□□ 1
ChpfQ6IQX7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.31■■□□□ 1
ChpfQ6IQX7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ChpfQ6IQX7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ChpfQ6IQX7 Gm13234-201ENSMUST00000120010 747 ntBASIC21.31■■□□□ 1
ChpfQ6IQX7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.31■■□□□ 1
ChpfQ6IQX7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
ChpfQ6IQX7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.31■■□□□ 1
ChpfQ6IQX7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ChpfQ6IQX7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.31■■□□□ 1
ChpfQ6IQX7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.31■■□□□ 1
ChpfQ6IQX7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.31■■□□□ 1
ChpfQ6IQX7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.31■■□□□ 1
ChpfQ6IQX7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ChpfQ6IQX7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ChpfQ6IQX7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ChpfQ6IQX7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ChpfQ6IQX7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.3■■□□□ 1
ChpfQ6IQX7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.3■■□□□ 1
ChpfQ6IQX7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ChpfQ6IQX7 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.3■■□□□ 1
ChpfQ6IQX7 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.3■■□□□ 1
ChpfQ6IQX7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.3■■□□□ 1
ChpfQ6IQX7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ChpfQ6IQX7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ChpfQ6IQX7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ChpfQ6IQX7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.3■■□□□ 1
ChpfQ6IQX7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ChpfQ6IQX7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
ChpfQ6IQX7 Reep4-203ENSMUST00000226563 1444 ntBASIC21.29■■□□□ 1
ChpfQ6IQX7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ChpfQ6IQX7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ChpfQ6IQX7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.29■■□□□ 1
ChpfQ6IQX7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.29■■□□□ 1
ChpfQ6IQX7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.29■■□□□ 1
ChpfQ6IQX7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ChpfQ6IQX7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ChpfQ6IQX7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.29■■□□□ 1
ChpfQ6IQX7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ChpfQ6IQX7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
ChpfQ6IQX7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ChpfQ6IQX7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.28■■□□□ 1
ChpfQ6IQX7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ChpfQ6IQX7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.28■■□□□ 1
ChpfQ6IQX7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.28■■□□□ 1
ChpfQ6IQX7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.28■■□□□ 1
ChpfQ6IQX7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
ChpfQ6IQX7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.28■■□□□ 1
ChpfQ6IQX7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ChpfQ6IQX7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ChpfQ6IQX7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
ChpfQ6IQX7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ChpfQ6IQX7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
ChpfQ6IQX7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ChpfQ6IQX7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.27■■□□□ 1
ChpfQ6IQX7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ChpfQ6IQX7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.27■■□□□ 1
ChpfQ6IQX7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.27■■□□□ 1
ChpfQ6IQX7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.27■■□□□ 1
ChpfQ6IQX7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ChpfQ6IQX7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.27■■□□□ 1
ChpfQ6IQX7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ChpfQ6IQX7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ChpfQ6IQX7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ChpfQ6IQX7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ChpfQ6IQX7 Gm10602-201ENSMUST00000098239 609 ntBASIC21.26■□□□□ 0.99
ChpfQ6IQX7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ChpfQ6IQX7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ChpfQ6IQX7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ChpfQ6IQX7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ChpfQ6IQX7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
ChpfQ6IQX7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ChpfQ6IQX7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ChpfQ6IQX7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ChpfQ6IQX7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ChpfQ6IQX7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ChpfQ6IQX7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms