Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Best3Q6H1V1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Best3Q6H1V1 Gm13146-201ENSMUST00000118508 780 ntBASIC23.79■■□□□ 1.4
Best3Q6H1V1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Best3Q6H1V1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC23.79■■□□□ 1.4
Best3Q6H1V1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.79■■□□□ 1.4
Best3Q6H1V1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.79■■□□□ 1.4
Best3Q6H1V1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Best3Q6H1V1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.79■■□□□ 1.4
Best3Q6H1V1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
Best3Q6H1V1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Best3Q6H1V1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.78■■□□□ 1.4
Best3Q6H1V1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Best3Q6H1V1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Best3Q6H1V1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Best3Q6H1V1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Best3Q6H1V1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Best3Q6H1V1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Best3Q6H1V1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Best3Q6H1V1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Best3Q6H1V1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Best3Q6H1V1 Gm12441-201ENSMUST00000121806 588 ntBASIC23.77■■□□□ 1.4
Best3Q6H1V1 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.77■■□□□ 1.4
Best3Q6H1V1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Best3Q6H1V1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Best3Q6H1V1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Best3Q6H1V1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Best3Q6H1V1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Best3Q6H1V1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Best3Q6H1V1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Best3Q6H1V1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Best3Q6H1V1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.76■■□□□ 1.39
Best3Q6H1V1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Best3Q6H1V1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.76■■□□□ 1.39
Best3Q6H1V1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Best3Q6H1V1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Best3Q6H1V1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Best3Q6H1V1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Best3Q6H1V1 Mir5133-201ENSMUST00000174955 77 ntBASIC23.75■■□□□ 1.39
Best3Q6H1V1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Best3Q6H1V1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.75■■□□□ 1.39
Best3Q6H1V1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Best3Q6H1V1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Best3Q6H1V1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Best3Q6H1V1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Best3Q6H1V1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Best3Q6H1V1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Best3Q6H1V1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.74■■□□□ 1.39
Best3Q6H1V1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Best3Q6H1V1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Best3Q6H1V1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
Best3Q6H1V1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Best3Q6H1V1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.73■■□□□ 1.39
Best3Q6H1V1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Best3Q6H1V1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Best3Q6H1V1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Best3Q6H1V1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Best3Q6H1V1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
Best3Q6H1V1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Best3Q6H1V1 Gm4968-201ENSMUST00000071458 858 ntBASIC23.72■■□□□ 1.39
Best3Q6H1V1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Best3Q6H1V1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Best3Q6H1V1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.72■■□□□ 1.39
Best3Q6H1V1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.72■■□□□ 1.39
Best3Q6H1V1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Best3Q6H1V1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Best3Q6H1V1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Best3Q6H1V1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Best3Q6H1V1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.71■■□□□ 1.39
Best3Q6H1V1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Best3Q6H1V1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Best3Q6H1V1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Best3Q6H1V1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Best3Q6H1V1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Best3Q6H1V1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Best3Q6H1V1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Best3Q6H1V1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Best3Q6H1V1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Best3Q6H1V1 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.69■■□□□ 1.38
Best3Q6H1V1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.69■■□□□ 1.38
Best3Q6H1V1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.69■■□□□ 1.38
Best3Q6H1V1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.69■■□□□ 1.38
Best3Q6H1V1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Best3Q6H1V1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Best3Q6H1V1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms