Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VclQ64727 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VclQ64727 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VclQ64727 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.45■□□□□ 0.7
VclQ64727 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VclQ64727 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VclQ64727 Spcs1-204ENSMUST00000226782 949 ntBASIC19.45■□□□□ 0.7
VclQ64727 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.45■□□□□ 0.7
VclQ64727 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VclQ64727 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VclQ64727 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VclQ64727 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.44■□□□□ 0.7
VclQ64727 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VclQ64727 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VclQ64727 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VclQ64727 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VclQ64727 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VclQ64727 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.44■□□□□ 0.7
VclQ64727 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VclQ64727 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VclQ64727 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VclQ64727 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VclQ64727 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VclQ64727 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VclQ64727 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VclQ64727 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VclQ64727 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
VclQ64727 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VclQ64727 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.43■□□□□ 0.7
VclQ64727 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.43■□□□□ 0.7
VclQ64727 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VclQ64727 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VclQ64727 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VclQ64727 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VclQ64727 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VclQ64727 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VclQ64727 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VclQ64727 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VclQ64727 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.42■□□□□ 0.7
VclQ64727 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VclQ64727 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.42■□□□□ 0.7
VclQ64727 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VclQ64727 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VclQ64727 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VclQ64727 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.41■□□□□ 0.7
VclQ64727 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VclQ64727 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.41■□□□□ 0.7
VclQ64727 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
VclQ64727 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VclQ64727 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VclQ64727 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VclQ64727 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VclQ64727 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VclQ64727 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VclQ64727 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VclQ64727 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VclQ64727 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VclQ64727 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VclQ64727 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VclQ64727 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.4■□□□□ 0.7
VclQ64727 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VclQ64727 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VclQ64727 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VclQ64727 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VclQ64727 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
VclQ64727 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.4■□□□□ 0.7
VclQ64727 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VclQ64727 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.39■□□□□ 0.7
VclQ64727 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VclQ64727 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
VclQ64727 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VclQ64727 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VclQ64727 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VclQ64727 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.39■□□□□ 0.69
VclQ64727 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VclQ64727 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VclQ64727 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VclQ64727 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VclQ64727 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.39■□□□□ 0.69
VclQ64727 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VclQ64727 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VclQ64727 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VclQ64727 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VclQ64727 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.38■□□□□ 0.69
VclQ64727 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VclQ64727 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
VclQ64727 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VclQ64727 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VclQ64727 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
VclQ64727 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
VclQ64727 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VclQ64727 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VclQ64727 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VclQ64727 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VclQ64727 Gm12251-201ENSMUST00000117893 792 ntBASIC19.37■□□□□ 0.69
VclQ64727 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.37■□□□□ 0.69
VclQ64727 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.37■□□□□ 0.69
VclQ64727 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VclQ64727 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
VclQ64727 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms