Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col7a1Q63870 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col7a1Q63870 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col7a1Q63870 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col7a1Q63870 Gm13146-201ENSMUST00000118508 780 ntBASIC16.91■□□□□ 0.3
Col7a1Q63870 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Col7a1Q63870 Gm10517-202ENSMUST00000192970 758 ntBASIC16.91■□□□□ 0.3
Col7a1Q63870 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col7a1Q63870 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col7a1Q63870 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.91■□□□□ 0.3
Col7a1Q63870 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col7a1Q63870 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.9■□□□□ 0.3
Col7a1Q63870 Gm27741-201ENSMUST00000185060 237 ntBASIC16.9■□□□□ 0.3
Col7a1Q63870 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.9■□□□□ 0.3
Col7a1Q63870 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col7a1Q63870 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col7a1Q63870 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col7a1Q63870 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.9■□□□□ 0.3
Col7a1Q63870 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.9■□□□□ 0.3
Col7a1Q63870 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col7a1Q63870 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col7a1Q63870 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col7a1Q63870 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col7a1Q63870 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col7a1Q63870 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col7a1Q63870 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col7a1Q63870 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Col7a1Q63870 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col7a1Q63870 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col7a1Q63870 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col7a1Q63870 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col7a1Q63870 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col7a1Q63870 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.88■□□□□ 0.29
Col7a1Q63870 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col7a1Q63870 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col7a1Q63870 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col7a1Q63870 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col7a1Q63870 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col7a1Q63870 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col7a1Q63870 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col7a1Q63870 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col7a1Q63870 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Col7a1Q63870 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Col7a1Q63870 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col7a1Q63870 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.87■□□□□ 0.29
Col7a1Q63870 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col7a1Q63870 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col7a1Q63870 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col7a1Q63870 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col7a1Q63870 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.86■□□□□ 0.29
Col7a1Q63870 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col7a1Q63870 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col7a1Q63870 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col7a1Q63870 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col7a1Q63870 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col7a1Q63870 Gm11249-201ENSMUST00000117071 859 ntBASIC16.86■□□□□ 0.29
Col7a1Q63870 Gm6433-201ENSMUST00000118634 875 ntBASIC16.86■□□□□ 0.29
Col7a1Q63870 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col7a1Q63870 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col7a1Q63870 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.86■□□□□ 0.29
Col7a1Q63870 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col7a1Q63870 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.85■□□□□ 0.29
Col7a1Q63870 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col7a1Q63870 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col7a1Q63870 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.85■□□□□ 0.29
Col7a1Q63870 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col7a1Q63870 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col7a1Q63870 Gm13534-201ENSMUST00000121169 513 ntBASIC16.85■□□□□ 0.29
Col7a1Q63870 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.85■□□□□ 0.29
Col7a1Q63870 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col7a1Q63870 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col7a1Q63870 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Col7a1Q63870 Gm10231-201ENSMUST00000181584 441 ntBASIC16.84■□□□□ 0.29
Col7a1Q63870 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col7a1Q63870 Gm10175-202ENSMUST00000208752 441 ntBASIC16.84■□□□□ 0.29
Col7a1Q63870 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col7a1Q63870 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col7a1Q63870 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Col7a1Q63870 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col7a1Q63870 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col7a1Q63870 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col7a1Q63870 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col7a1Q63870 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.84■□□□□ 0.29
Col7a1Q63870 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.84■□□□□ 0.29
Col7a1Q63870 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col7a1Q63870 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col7a1Q63870 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Col7a1Q63870 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col7a1Q63870 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col7a1Q63870 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.83■□□□□ 0.28
Col7a1Q63870 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col7a1Q63870 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col7a1Q63870 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col7a1Q63870 Gm7367-201ENSMUST00000057611 492 ntBASIC16.83■□□□□ 0.28
Col7a1Q63870 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.82■□□□□ 0.28
Col7a1Q63870 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col7a1Q63870 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.82■□□□□ 0.28
Col7a1Q63870 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Col7a1Q63870 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col7a1Q63870 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms