Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.09■□□□□ 0.65
AtmQ62388 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AtmQ62388 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AtmQ62388 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
AtmQ62388 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
AtmQ62388 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AtmQ62388 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AtmQ62388 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
AtmQ62388 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AtmQ62388 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AtmQ62388 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
AtmQ62388 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.08■□□□□ 0.64
AtmQ62388 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.08■□□□□ 0.64
AtmQ62388 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AtmQ62388 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AtmQ62388 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.07■□□□□ 0.64
AtmQ62388 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
AtmQ62388 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
AtmQ62388 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.07■□□□□ 0.64
AtmQ62388 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AtmQ62388 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
AtmQ62388 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
AtmQ62388 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.06■□□□□ 0.64
AtmQ62388 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
AtmQ62388 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AtmQ62388 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AtmQ62388 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.06■□□□□ 0.64
AtmQ62388 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AtmQ62388 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AtmQ62388 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
AtmQ62388 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
AtmQ62388 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
AtmQ62388 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AtmQ62388 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
AtmQ62388 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
AtmQ62388 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
AtmQ62388 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
AtmQ62388 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.05■□□□□ 0.64
AtmQ62388 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
AtmQ62388 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
AtmQ62388 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AtmQ62388 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AtmQ62388 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AtmQ62388 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AtmQ62388 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
AtmQ62388 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AtmQ62388 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AtmQ62388 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.03■□□□□ 0.64
AtmQ62388 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
AtmQ62388 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AtmQ62388 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AtmQ62388 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AtmQ62388 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AtmQ62388 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AtmQ62388 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AtmQ62388 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AtmQ62388 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.03■□□□□ 0.64
AtmQ62388 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.03■□□□□ 0.64
AtmQ62388 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AtmQ62388 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AtmQ62388 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.03■□□□□ 0.64
AtmQ62388 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.02■□□□□ 0.64
AtmQ62388 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
AtmQ62388 Gm5408-201ENSMUST00000197998 747 ntBASIC19.02■□□□□ 0.63
AtmQ62388 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AtmQ62388 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
AtmQ62388 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
AtmQ62388 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AtmQ62388 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AtmQ62388 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AtmQ62388 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.01■□□□□ 0.63
AtmQ62388 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AtmQ62388 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AtmQ62388 Gm715-201ENSMUST00000117865 831 ntBASIC19.01■□□□□ 0.63
AtmQ62388 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.01■□□□□ 0.63
AtmQ62388 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AtmQ62388 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AtmQ62388 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.01■□□□□ 0.63
AtmQ62388 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AtmQ62388 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AtmQ62388 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
AtmQ62388 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AtmQ62388 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AtmQ62388 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19■□□□□ 0.63
AtmQ62388 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19■□□□□ 0.63
AtmQ62388 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19■□□□□ 0.63
AtmQ62388 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AtmQ62388 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
AtmQ62388 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AtmQ62388 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
AtmQ62388 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AtmQ62388 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AtmQ62388 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
AtmQ62388 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
AtmQ62388 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.98■□□□□ 0.63
AtmQ62388 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
AtmQ62388 Gm15565-201ENSMUST00000118890 427 ntBASIC18.98■□□□□ 0.63
AtmQ62388 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
AtmQ62388 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AtmQ62388 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms