Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
Six3Q62233 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.4■□□□□ 0.7
Six3Q62233 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six3Q62233 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six3Q62233 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.4■□□□□ 0.7
Six3Q62233 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Six3Q62233 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Six3Q62233 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Six3Q62233 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six3Q62233 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six3Q62233 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six3Q62233 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six3Q62233 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Six3Q62233 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six3Q62233 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six3Q62233 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Six3Q62233 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.38■□□□□ 0.69
Six3Q62233 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six3Q62233 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Six3Q62233 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Six3Q62233 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.38■□□□□ 0.69
Six3Q62233 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six3Q62233 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six3Q62233 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.37■□□□□ 0.69
Six3Q62233 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six3Q62233 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six3Q62233 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six3Q62233 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.37■□□□□ 0.69
Six3Q62233 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.37■□□□□ 0.69
Six3Q62233 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.37■□□□□ 0.69
Six3Q62233 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six3Q62233 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Six3Q62233 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Six3Q62233 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six3Q62233 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Six3Q62233 Mir6236-201ENSMUST00000184437 123 ntBASIC19.36■□□□□ 0.69
Six3Q62233 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Six3Q62233 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Six3Q62233 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Six3Q62233 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Six3Q62233 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Six3Q62233 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six3Q62233 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six3Q62233 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six3Q62233 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six3Q62233 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
Six3Q62233 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six3Q62233 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.35■□□□□ 0.69
Six3Q62233 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.35■□□□□ 0.69
Six3Q62233 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six3Q62233 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six3Q62233 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Six3Q62233 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.35■□□□□ 0.69
Six3Q62233 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.34■□□□□ 0.69
Six3Q62233 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six3Q62233 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Six3Q62233 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six3Q62233 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Six3Q62233 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.34■□□□□ 0.69
Six3Q62233 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.34■□□□□ 0.69
Six3Q62233 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.34■□□□□ 0.69
Six3Q62233 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Six3Q62233 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six3Q62233 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Six3Q62233 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Six3Q62233 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Six3Q62233 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Six3Q62233 Gm22238-201ENSMUST00000175222 88 ntBASIC19.33■□□□□ 0.68
Six3Q62233 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.33■□□□□ 0.68
Six3Q62233 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six3Q62233 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Six3Q62233 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Six3Q62233 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six3Q62233 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six3Q62233 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Six3Q62233 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Six3Q62233 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six3Q62233 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six3Q62233 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Six3Q62233 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six3Q62233 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six3Q62233 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six3Q62233 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Six3Q62233 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six3Q62233 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six3Q62233 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six3Q62233 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Six3Q62233 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six3Q62233 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six3Q62233 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.3■□□□□ 0.68
Six3Q62233 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Six3Q62233 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.3■□□□□ 0.68
Six3Q62233 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six3Q62233 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Six3Q62233 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six3Q62233 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six3Q62233 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.29■□□□□ 0.68
Six3Q62233 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six3Q62233 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six3Q62233 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms