Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Scn9aQ62205 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Scn9aQ62205 Mir7071-201ENSMUST00000184847 69 ntBASIC23.82■■□□□ 1.4
Scn9aQ62205 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC23.82■■□□□ 1.4
Scn9aQ62205 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn9aQ62205 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Scn9aQ62205 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scn9aQ62205 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scn9aQ62205 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn9aQ62205 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn9aQ62205 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.81■■□□□ 1.4
Scn9aQ62205 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn9aQ62205 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scn9aQ62205 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn9aQ62205 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn9aQ62205 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn9aQ62205 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn9aQ62205 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn9aQ62205 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.8■■□□□ 1.4
Scn9aQ62205 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Scn9aQ62205 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn9aQ62205 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Scn9aQ62205 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scn9aQ62205 Gm8520-201ENSMUST00000186517 868 ntBASIC23.8■■□□□ 1.4
Scn9aQ62205 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC23.8■■□□□ 1.4
Scn9aQ62205 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scn9aQ62205 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn9aQ62205 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn9aQ62205 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn9aQ62205 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.79■■□□□ 1.4
Scn9aQ62205 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scn9aQ62205 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.79■■□□□ 1.4
Scn9aQ62205 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scn9aQ62205 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scn9aQ62205 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Scn9aQ62205 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Scn9aQ62205 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
Scn9aQ62205 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn9aQ62205 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn9aQ62205 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn9aQ62205 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scn9aQ62205 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Scn9aQ62205 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Scn9aQ62205 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scn9aQ62205 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.77■■□□□ 1.4
Scn9aQ62205 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Scn9aQ62205 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn9aQ62205 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn9aQ62205 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Scn9aQ62205 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scn9aQ62205 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC23.75■■□□□ 1.39
Scn9aQ62205 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Scn9aQ62205 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn9aQ62205 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Scn9aQ62205 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scn9aQ62205 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Scn9aQ62205 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.75■■□□□ 1.39
Scn9aQ62205 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.74■■□□□ 1.39
Scn9aQ62205 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
Scn9aQ62205 Gm13168-201ENSMUST00000121771 632 ntBASIC23.74■■□□□ 1.39
Scn9aQ62205 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Scn9aQ62205 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn9aQ62205 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn9aQ62205 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn9aQ62205 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn9aQ62205 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Scn9aQ62205 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scn9aQ62205 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC23.74■■□□□ 1.39
Scn9aQ62205 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.74■■□□□ 1.39
Scn9aQ62205 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.74■■□□□ 1.39
Scn9aQ62205 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn9aQ62205 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC23.73■■□□□ 1.39
Scn9aQ62205 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.73■■□□□ 1.39
Scn9aQ62205 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn9aQ62205 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn9aQ62205 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scn9aQ62205 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
Scn9aQ62205 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn9aQ62205 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.72■■□□□ 1.39
Scn9aQ62205 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Scn9aQ62205 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
Scn9aQ62205 Gm10571-201ENSMUST00000097869 1638 ntBASIC23.72■■□□□ 1.39
Scn9aQ62205 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn9aQ62205 Gm22325-201ENSMUST00000158904 308 ntBASIC23.72■■□□□ 1.39
Scn9aQ62205 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Scn9aQ62205 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scn9aQ62205 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Scn9aQ62205 Gm13146-201ENSMUST00000118508 780 ntBASIC23.71■■□□□ 1.39
Scn9aQ62205 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn9aQ62205 Mir6236-201ENSMUST00000184437 123 ntBASIC23.71■■□□□ 1.39
Scn9aQ62205 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn9aQ62205 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn9aQ62205 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.71■■□□□ 1.39
Scn9aQ62205 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn9aQ62205 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC23.71■■□□□ 1.39
Scn9aQ62205 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23.71■■□□□ 1.39
Scn9aQ62205 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scn9aQ62205 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Scn9aQ62205 Gm3807-201ENSMUST00000193520 1168 ntBASIC23.71■■□□□ 1.39
Scn9aQ62205 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms