Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rai1Q61818 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rai1Q61818 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rai1Q61818 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rai1Q61818 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rai1Q61818 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rai1Q61818 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rai1Q61818 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Rai1Q61818 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.39■□□□□ 0.7
Rai1Q61818 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rai1Q61818 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rai1Q61818 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rai1Q61818 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rai1Q61818 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rai1Q61818 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rai1Q61818 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rai1Q61818 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rai1Q61818 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rai1Q61818 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rai1Q61818 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.38■□□□□ 0.69
Rai1Q61818 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.37■□□□□ 0.69
Rai1Q61818 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rai1Q61818 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rai1Q61818 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rai1Q61818 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rai1Q61818 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rai1Q61818 Nespas-201ENSMUST00000143738 1083 ntBASIC19.37■□□□□ 0.69
Rai1Q61818 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rai1Q61818 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rai1Q61818 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rai1Q61818 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rai1Q61818 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rai1Q61818 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.35■□□□□ 0.69
Rai1Q61818 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rai1Q61818 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rai1Q61818 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rai1Q61818 Gm12441-201ENSMUST00000121806 588 ntBASIC19.35■□□□□ 0.69
Rai1Q61818 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rai1Q61818 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rai1Q61818 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rai1Q61818 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rai1Q61818 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rai1Q61818 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rai1Q61818 Gm7514-201ENSMUST00000209475 934 ntBASIC19.35■□□□□ 0.69
Rai1Q61818 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rai1Q61818 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rai1Q61818 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rai1Q61818 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rai1Q61818 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rai1Q61818 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rai1Q61818 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rai1Q61818 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.34■□□□□ 0.69
Rai1Q61818 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.34■□□□□ 0.69
Rai1Q61818 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rai1Q61818 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rai1Q61818 Gm10653-202ENSMUST00000139570 835 ntBASIC19.33■□□□□ 0.69
Rai1Q61818 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.33■□□□□ 0.69
Rai1Q61818 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.33■□□□□ 0.69
Rai1Q61818 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rai1Q61818 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rai1Q61818 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rai1Q61818 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rai1Q61818 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.33■□□□□ 0.68
Rai1Q61818 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rai1Q61818 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rai1Q61818 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rai1Q61818 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rai1Q61818 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rai1Q61818 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rai1Q61818 Gm13148-201ENSMUST00000118892 745 ntBASIC19.32■□□□□ 0.68
Rai1Q61818 Mir5133-201ENSMUST00000174955 77 ntBASIC19.32■□□□□ 0.68
Rai1Q61818 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rai1Q61818 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rai1Q61818 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rai1Q61818 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rai1Q61818 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rai1Q61818 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rai1Q61818 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rai1Q61818 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rai1Q61818 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rai1Q61818 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.31■□□□□ 0.68
Rai1Q61818 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rai1Q61818 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rai1Q61818 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rai1Q61818 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rai1Q61818 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.31■□□□□ 0.68
Rai1Q61818 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Rai1Q61818 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.31■□□□□ 0.68
Rai1Q61818 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rai1Q61818 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rai1Q61818 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rai1Q61818 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rai1Q61818 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rai1Q61818 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rai1Q61818 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.3■□□□□ 0.68
Rai1Q61818 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rai1Q61818 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rai1Q61818 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rai1Q61818 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rai1Q61818 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms