Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Foxc1Q61572 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Foxc1Q61572 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Foxc1Q61572 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.41□□□□□ -0.1
Foxc1Q61572 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.41□□□□□ -0.1
Foxc1Q61572 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Foxc1Q61572 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Foxc1Q61572 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxc1Q61572 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Foxc1Q61572 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Foxc1Q61572 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxc1Q61572 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Foxc1Q61572 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxc1Q61572 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.4□□□□□ -0.1
Foxc1Q61572 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.4□□□□□ -0.1
Foxc1Q61572 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxc1Q61572 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Foxc1Q61572 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Foxc1Q61572 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Foxc1Q61572 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Foxc1Q61572 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc1Q61572 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc1Q61572 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc1Q61572 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Foxc1Q61572 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc1Q61572 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc1Q61572 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc1Q61572 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc1Q61572 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc1Q61572 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc1Q61572 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc1Q61572 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.38□□□□□ -0.11
Foxc1Q61572 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc1Q61572 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc1Q61572 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc1Q61572 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Foxc1Q61572 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Foxc1Q61572 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.38□□□□□ -0.11
Foxc1Q61572 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.38□□□□□ -0.11
Foxc1Q61572 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc1Q61572 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc1Q61572 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc1Q61572 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc1Q61572 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc1Q61572 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Foxc1Q61572 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Foxc1Q61572 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Foxc1Q61572 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.37□□□□□ -0.11
Foxc1Q61572 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.37□□□□□ -0.11
Foxc1Q61572 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.37□□□□□ -0.11
Foxc1Q61572 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc1Q61572 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.36□□□□□ -0.11
Foxc1Q61572 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Foxc1Q61572 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc1Q61572 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Foxc1Q61572 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Foxc1Q61572 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc1Q61572 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc1Q61572 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Foxc1Q61572 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Foxc1Q61572 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Foxc1Q61572 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms