Protein–RNA interactions for Protein: Q61476

Cd55b, Complement decay-accelerating factor transmembrane isoform, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd55bQ61476 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd55bQ61476 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd55bQ61476 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cd55bQ61476 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd55bQ61476 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd55bQ61476 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cd55bQ61476 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd55bQ61476 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd55bQ61476 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Cd55bQ61476 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd55bQ61476 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd55bQ61476 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd55bQ61476 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd55bQ61476 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd55bQ61476 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.38■□□□□ 0.37
Cd55bQ61476 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd55bQ61476 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd55bQ61476 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd55bQ61476 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cd55bQ61476 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd55bQ61476 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cd55bQ61476 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd55bQ61476 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.36■□□□□ 0.37
Cd55bQ61476 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd55bQ61476 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd55bQ61476 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd55bQ61476 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd55bQ61476 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd55bQ61476 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd55bQ61476 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cd55bQ61476 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd55bQ61476 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.35■□□□□ 0.37
Cd55bQ61476 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.35■□□□□ 0.37
Cd55bQ61476 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd55bQ61476 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd55bQ61476 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd55bQ61476 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cd55bQ61476 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd55bQ61476 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd55bQ61476 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd55bQ61476 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd55bQ61476 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd55bQ61476 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd55bQ61476 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cd55bQ61476 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd55bQ61476 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cd55bQ61476 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd55bQ61476 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cd55bQ61476 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd55bQ61476 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd55bQ61476 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cd55bQ61476 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd55bQ61476 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cd55bQ61476 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd55bQ61476 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.33■□□□□ 0.36
Cd55bQ61476 Gm8493-201ENSMUST00000196881 489 ntBASIC17.33■□□□□ 0.36
Cd55bQ61476 Gm6139-201ENSMUST00000079261 882 ntBASIC17.33■□□□□ 0.36
Cd55bQ61476 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd55bQ61476 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd55bQ61476 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.33■□□□□ 0.36
Cd55bQ61476 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd55bQ61476 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.32■□□□□ 0.36
Cd55bQ61476 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
Cd55bQ61476 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cd55bQ61476 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd55bQ61476 Gm12251-201ENSMUST00000117893 792 ntBASIC17.32■□□□□ 0.36
Cd55bQ61476 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.32■□□□□ 0.36
Cd55bQ61476 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cd55bQ61476 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cd55bQ61476 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.32■□□□□ 0.36
Cd55bQ61476 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd55bQ61476 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd55bQ61476 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cd55bQ61476 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd55bQ61476 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd55bQ61476 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd55bQ61476 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd55bQ61476 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd55bQ61476 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd55bQ61476 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cd55bQ61476 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd55bQ61476 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Cd55bQ61476 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd55bQ61476 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cd55bQ61476 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cd55bQ61476 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cd55bQ61476 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd55bQ61476 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd55bQ61476 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.31■□□□□ 0.36
Cd55bQ61476 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd55bQ61476 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Cd55bQ61476 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd55bQ61476 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd55bQ61476 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd55bQ61476 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd55bQ61476 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd55bQ61476 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd55bQ61476 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.3■□□□□ 0.36
Cd55bQ61476 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.3■□□□□ 0.36
Cd55bQ61476 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms