Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trpc1Q61056 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trpc1Q61056 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trpc1Q61056 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.21■□□□□ 0.67
Trpc1Q61056 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trpc1Q61056 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trpc1Q61056 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trpc1Q61056 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.21■□□□□ 0.67
Trpc1Q61056 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Trpc1Q61056 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trpc1Q61056 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trpc1Q61056 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trpc1Q61056 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trpc1Q61056 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trpc1Q61056 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpc1Q61056 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trpc1Q61056 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpc1Q61056 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trpc1Q61056 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trpc1Q61056 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpc1Q61056 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpc1Q61056 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.19■□□□□ 0.66
Trpc1Q61056 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpc1Q61056 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trpc1Q61056 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpc1Q61056 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trpc1Q61056 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.19■□□□□ 0.66
Trpc1Q61056 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.19■□□□□ 0.66
Trpc1Q61056 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpc1Q61056 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpc1Q61056 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trpc1Q61056 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trpc1Q61056 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trpc1Q61056 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trpc1Q61056 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trpc1Q61056 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.18■□□□□ 0.66
Trpc1Q61056 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trpc1Q61056 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Trpc1Q61056 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.18■□□□□ 0.66
Trpc1Q61056 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trpc1Q61056 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trpc1Q61056 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trpc1Q61056 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trpc1Q61056 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.17■□□□□ 0.66
Trpc1Q61056 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpc1Q61056 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpc1Q61056 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trpc1Q61056 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.17■□□□□ 0.66
Trpc1Q61056 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trpc1Q61056 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trpc1Q61056 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trpc1Q61056 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trpc1Q61056 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpc1Q61056 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Trpc1Q61056 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.16■□□□□ 0.66
Trpc1Q61056 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trpc1Q61056 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trpc1Q61056 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trpc1Q61056 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpc1Q61056 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trpc1Q61056 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trpc1Q61056 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trpc1Q61056 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.15■□□□□ 0.66
Trpc1Q61056 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trpc1Q61056 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trpc1Q61056 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trpc1Q61056 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.15■□□□□ 0.66
Trpc1Q61056 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trpc1Q61056 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trpc1Q61056 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trpc1Q61056 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trpc1Q61056 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trpc1Q61056 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Trpc1Q61056 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trpc1Q61056 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Trpc1Q61056 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trpc1Q61056 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.14■□□□□ 0.65
Trpc1Q61056 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trpc1Q61056 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.14■□□□□ 0.65
Trpc1Q61056 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trpc1Q61056 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trpc1Q61056 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trpc1Q61056 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trpc1Q61056 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trpc1Q61056 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trpc1Q61056 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trpc1Q61056 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trpc1Q61056 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.13■□□□□ 0.65
Trpc1Q61056 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trpc1Q61056 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trpc1Q61056 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trpc1Q61056 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trpc1Q61056 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Trpc1Q61056 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trpc1Q61056 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trpc1Q61056 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trpc1Q61056 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trpc1Q61056 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.12■□□□□ 0.65
Trpc1Q61056 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms