Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scarb1Q61009 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Scarb1Q61009 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarb1Q61009 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarb1Q61009 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.63■□□□□ 0.25
Scarb1Q61009 Gm12366-201ENSMUST00000121722 873 ntBASIC16.63■□□□□ 0.25
Scarb1Q61009 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.63■□□□□ 0.25
Scarb1Q61009 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.63■□□□□ 0.25
Scarb1Q61009 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scarb1Q61009 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.63■□□□□ 0.25
Scarb1Q61009 Gm5786-201ENSMUST00000085368 882 ntBASIC16.63■□□□□ 0.25
Scarb1Q61009 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.63■□□□□ 0.25
Scarb1Q61009 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarb1Q61009 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scarb1Q61009 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarb1Q61009 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Scarb1Q61009 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Scarb1Q61009 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarb1Q61009 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scarb1Q61009 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarb1Q61009 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarb1Q61009 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarb1Q61009 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarb1Q61009 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarb1Q61009 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarb1Q61009 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarb1Q61009 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.62■□□□□ 0.25
Scarb1Q61009 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 Golph3-205ENSMUST00000228671 2842 ntBASIC16.61■□□□□ 0.25
Scarb1Q61009 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scarb1Q61009 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scarb1Q61009 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scarb1Q61009 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Scarb1Q61009 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.6■□□□□ 0.25
Scarb1Q61009 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scarb1Q61009 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scarb1Q61009 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Scarb1Q61009 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.59■□□□□ 0.25
Scarb1Q61009 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.59■□□□□ 0.25
Scarb1Q61009 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Scarb1Q61009 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scarb1Q61009 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scarb1Q61009 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scarb1Q61009 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.58■□□□□ 0.24
Scarb1Q61009 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scarb1Q61009 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scarb1Q61009 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scarb1Q61009 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scarb1Q61009 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scarb1Q61009 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Scarb1Q61009 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Scarb1Q61009 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scarb1Q61009 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Scarb1Q61009 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scarb1Q61009 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scarb1Q61009 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scarb1Q61009 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scarb1Q61009 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scarb1Q61009 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scarb1Q61009 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.56■□□□□ 0.24
Scarb1Q61009 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scarb1Q61009 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms