Protein–RNA interactions for Protein: Q61001

Lama5, Laminin subunit alpha-5, mousemouse

Predictions only

Length 3,718 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama5Q61001 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.4■□□□□ 0.38
Lama5Q61001 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lama5Q61001 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lama5Q61001 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lama5Q61001 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lama5Q61001 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Lama5Q61001 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lama5Q61001 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.39■□□□□ 0.37
Lama5Q61001 Gm13836-201ENSMUST00000121159 501 ntBASIC17.39■□□□□ 0.37
Lama5Q61001 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lama5Q61001 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lama5Q61001 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lama5Q61001 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lama5Q61001 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Lama5Q61001 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lama5Q61001 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lama5Q61001 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lama5Q61001 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lama5Q61001 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.38■□□□□ 0.37
Lama5Q61001 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lama5Q61001 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lama5Q61001 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.38■□□□□ 0.37
Lama5Q61001 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Lama5Q61001 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lama5Q61001 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.38■□□□□ 0.37
Lama5Q61001 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.37■□□□□ 0.37
Lama5Q61001 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lama5Q61001 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Lama5Q61001 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lama5Q61001 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lama5Q61001 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lama5Q61001 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Lama5Q61001 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lama5Q61001 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lama5Q61001 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lama5Q61001 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lama5Q61001 Gm5408-201ENSMUST00000197998 747 ntBASIC17.36■□□□□ 0.37
Lama5Q61001 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lama5Q61001 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Lama5Q61001 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.36■□□□□ 0.37
Lama5Q61001 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lama5Q61001 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lama5Q61001 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.36■□□□□ 0.37
Lama5Q61001 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lama5Q61001 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lama5Q61001 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Lama5Q61001 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lama5Q61001 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lama5Q61001 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lama5Q61001 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.35■□□□□ 0.37
Lama5Q61001 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lama5Q61001 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lama5Q61001 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.35■□□□□ 0.37
Lama5Q61001 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lama5Q61001 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lama5Q61001 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lama5Q61001 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lama5Q61001 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lama5Q61001 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lama5Q61001 Gm715-201ENSMUST00000117865 831 ntBASIC17.34■□□□□ 0.37
Lama5Q61001 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lama5Q61001 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lama5Q61001 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lama5Q61001 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.34■□□□□ 0.37
Lama5Q61001 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lama5Q61001 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.33■□□□□ 0.37
Lama5Q61001 Trmt13-210ENSMUST00000198454 880 ntBASIC17.33■□□□□ 0.37
Lama5Q61001 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Lama5Q61001 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lama5Q61001 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Lama5Q61001 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lama5Q61001 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lama5Q61001 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lama5Q61001 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lama5Q61001 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.33■□□□□ 0.36
Lama5Q61001 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lama5Q61001 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lama5Q61001 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lama5Q61001 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.32■□□□□ 0.36
Lama5Q61001 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.32■□□□□ 0.36
Lama5Q61001 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lama5Q61001 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.32■□□□□ 0.36
Lama5Q61001 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lama5Q61001 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Lama5Q61001 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Lama5Q61001 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lama5Q61001 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.32■□□□□ 0.36
Lama5Q61001 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lama5Q61001 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lama5Q61001 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lama5Q61001 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.31■□□□□ 0.36
Lama5Q61001 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lama5Q61001 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.31■□□□□ 0.36
Lama5Q61001 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lama5Q61001 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.31■□□□□ 0.36
Lama5Q61001 Gm26524-201ENSMUST00000192339 390 ntBASIC17.31■□□□□ 0.36
Lama5Q61001 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lama5Q61001 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lama5Q61001 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lama5Q61001 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms