Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Tnfaip3Q60769 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfaip3Q60769 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfaip3Q60769 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.63■□□□□ 0.57
Tnfaip3Q60769 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfaip3Q60769 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfaip3Q60769 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfaip3Q60769 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tnfaip3Q60769 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfaip3Q60769 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfaip3Q60769 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tnfaip3Q60769 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfaip3Q60769 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfaip3Q60769 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfaip3Q60769 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfaip3Q60769 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfaip3Q60769 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfaip3Q60769 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfaip3Q60769 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tnfaip3Q60769 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfaip3Q60769 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tnfaip3Q60769 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Tnfaip3Q60769 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfaip3Q60769 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfaip3Q60769 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Tnfaip3Q60769 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.59■□□□□ 0.57
Tnfaip3Q60769 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfaip3Q60769 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
Tnfaip3Q60769 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfaip3Q60769 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tnfaip3Q60769 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfaip3Q60769 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfaip3Q60769 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfaip3Q60769 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tnfaip3Q60769 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tnfaip3Q60769 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.58■□□□□ 0.56
Tnfaip3Q60769 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfaip3Q60769 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfaip3Q60769 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfaip3Q60769 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfaip3Q60769 Gm26833-201ENSMUST00000180899 440 ntBASIC18.57■□□□□ 0.56
Tnfaip3Q60769 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfaip3Q60769 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfaip3Q60769 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfaip3Q60769 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Tnfaip3Q60769 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfaip3Q60769 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfaip3Q60769 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Iqck-206ENSMUST00000208658 2891 ntBASIC18.56■□□□□ 0.56
Tnfaip3Q60769 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfaip3Q60769 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.55■□□□□ 0.56
Tnfaip3Q60769 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tnfaip3Q60769 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Tnfaip3Q60769 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfaip3Q60769 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tnfaip3Q60769 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfaip3Q60769 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfaip3Q60769 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfaip3Q60769 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfaip3Q60769 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfaip3Q60769 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms