Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav7d-3Q5R1I1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav7d-3Q5R1I1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-3Q5R1I1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav7d-3Q5R1I1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7d-3Q5R1I1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7d-3Q5R1I1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7d-3Q5R1I1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Trav7d-3Q5R1I1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7d-3Q5R1I1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav7d-3Q5R1I1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7d-3Q5R1I1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7d-3Q5R1I1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7d-3Q5R1I1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav7d-3Q5R1I1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Trav7d-3Q5R1I1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7d-3Q5R1I1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-3Q5R1I1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-3Q5R1I1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-3Q5R1I1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-3Q5R1I1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Gm15820-201ENSMUST00000201566 728 ntBASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-3Q5R1I1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms