Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-4Q5R1I0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-4Q5R1I0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Trav6d-4Q5R1I0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-4Q5R1I0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Trav6d-4Q5R1I0 Smad6-203ENSMUST00000179458 273 ntBASIC16.67■□□□□ 0.26
Trav6d-4Q5R1I0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav6d-4Q5R1I0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-4Q5R1I0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-4Q5R1I0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trav6d-4Q5R1I0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-4Q5R1I0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-4Q5R1I0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-4Q5R1I0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-4Q5R1I0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-4Q5R1I0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-4Q5R1I0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-4Q5R1I0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-4Q5R1I0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.63■□□□□ 0.25
Trav6d-4Q5R1I0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav6d-4Q5R1I0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.63■□□□□ 0.25
Trav6d-4Q5R1I0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.63■□□□□ 0.25
Trav6d-4Q5R1I0 Gm40848-201ENSMUST00000221998 324 ntBASIC16.63■□□□□ 0.25
Trav6d-4Q5R1I0 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.63■□□□□ 0.25
Trav6d-4Q5R1I0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6d-4Q5R1I0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6d-4Q5R1I0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav6d-4Q5R1I0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Gm43060-201ENSMUST00000200621 289 ntBASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6d-4Q5R1I0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.61■□□□□ 0.25
Trav6d-4Q5R1I0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav6d-4Q5R1I0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6d-4Q5R1I0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6d-4Q5R1I0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.61■□□□□ 0.25
Trav6d-4Q5R1I0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.61■□□□□ 0.25
Trav6d-4Q5R1I0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6d-4Q5R1I0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6d-4Q5R1I0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms