Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-4Q5R1H9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7d-4Q5R1H9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7d-4Q5R1H9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Trav7d-4Q5R1H9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7d-4Q5R1H9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav7d-4Q5R1H9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav7d-4Q5R1H9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav7d-4Q5R1H9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-4Q5R1H9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-4Q5R1H9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-4Q5R1H9 Gm8503-201ENSMUST00000118131 455 ntBASIC15.07■□□□□ 0
Trav7d-4Q5R1H9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-4Q5R1H9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-4Q5R1H9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-4Q5R1H9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-4Q5R1H9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav7d-4Q5R1H9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav7d-4Q5R1H9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav7d-4Q5R1H9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav7d-4Q5R1H9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav7d-4Q5R1H9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav7d-4Q5R1H9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-4Q5R1H9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav7d-4Q5R1H9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7d-4Q5R1H9 Gm11599-201ENSMUST00000118720 878 ntBASIC15.03■□□□□ -0
Trav7d-4Q5R1H9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7d-4Q5R1H9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.03■□□□□ -0
Trav7d-4Q5R1H9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav7d-4Q5R1H9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7d-4Q5R1H9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7d-4Q5R1H9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7d-4Q5R1H9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7d-4Q5R1H9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7d-4Q5R1H9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms