Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Gm10420-201ENSMUST00000121713 882 ntBASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav15-1-dv6-1Q5R1D2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav15-1-dv6-1Q5R1D2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms