Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.63■□□□□ 0.73
Col27a1Q5QNQ9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.63■□□□□ 0.73
Col27a1Q5QNQ9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col27a1Q5QNQ9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col27a1Q5QNQ9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col27a1Q5QNQ9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col27a1Q5QNQ9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col27a1Q5QNQ9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.62■□□□□ 0.73
Col27a1Q5QNQ9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col27a1Q5QNQ9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Col27a1Q5QNQ9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col27a1Q5QNQ9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col27a1Q5QNQ9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col27a1Q5QNQ9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col27a1Q5QNQ9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Col27a1Q5QNQ9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.6■□□□□ 0.73
Col27a1Q5QNQ9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.6■□□□□ 0.73
Col27a1Q5QNQ9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col27a1Q5QNQ9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col27a1Q5QNQ9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col27a1Q5QNQ9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Col27a1Q5QNQ9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Col27a1Q5QNQ9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col27a1Q5QNQ9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col27a1Q5QNQ9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col27a1Q5QNQ9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.58■□□□□ 0.73
Col27a1Q5QNQ9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col27a1Q5QNQ9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col27a1Q5QNQ9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.58■□□□□ 0.73
Col27a1Q5QNQ9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col27a1Q5QNQ9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col27a1Q5QNQ9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col27a1Q5QNQ9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col27a1Q5QNQ9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col27a1Q5QNQ9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col27a1Q5QNQ9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.58■□□□□ 0.72
Col27a1Q5QNQ9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col27a1Q5QNQ9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col27a1Q5QNQ9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Col27a1Q5QNQ9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col27a1Q5QNQ9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col27a1Q5QNQ9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col27a1Q5QNQ9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col27a1Q5QNQ9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col27a1Q5QNQ9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col27a1Q5QNQ9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Col27a1Q5QNQ9 Gm38205-201ENSMUST00000192243 258 ntBASIC19.57■□□□□ 0.72
Col27a1Q5QNQ9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col27a1Q5QNQ9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col27a1Q5QNQ9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col27a1Q5QNQ9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col27a1Q5QNQ9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col27a1Q5QNQ9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col27a1Q5QNQ9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col27a1Q5QNQ9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col27a1Q5QNQ9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col27a1Q5QNQ9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col27a1Q5QNQ9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col27a1Q5QNQ9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col27a1Q5QNQ9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.54■□□□□ 0.72
Col27a1Q5QNQ9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col27a1Q5QNQ9 Gm13534-201ENSMUST00000121169 513 ntBASIC19.54■□□□□ 0.72
Col27a1Q5QNQ9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col27a1Q5QNQ9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.53■□□□□ 0.72
Col27a1Q5QNQ9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col27a1Q5QNQ9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col27a1Q5QNQ9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.53■□□□□ 0.72
Col27a1Q5QNQ9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.53■□□□□ 0.72
Col27a1Q5QNQ9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Col27a1Q5QNQ9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Col27a1Q5QNQ9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms