Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clhc1Q5M6W3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clhc1Q5M6W3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clhc1Q5M6W3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.04■□□□□ 0.64
Clhc1Q5M6W3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clhc1Q5M6W3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Clhc1Q5M6W3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clhc1Q5M6W3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.04■□□□□ 0.64
Clhc1Q5M6W3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clhc1Q5M6W3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clhc1Q5M6W3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clhc1Q5M6W3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clhc1Q5M6W3 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Clhc1Q5M6W3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clhc1Q5M6W3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clhc1Q5M6W3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clhc1Q5M6W3 Gm10232-201ENSMUST00000089221 720 ntBASIC19.02■□□□□ 0.64
Clhc1Q5M6W3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clhc1Q5M6W3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clhc1Q5M6W3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.02■□□□□ 0.63
Clhc1Q5M6W3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clhc1Q5M6W3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clhc1Q5M6W3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clhc1Q5M6W3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Clhc1Q5M6W3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.01■□□□□ 0.63
Clhc1Q5M6W3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clhc1Q5M6W3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clhc1Q5M6W3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Clhc1Q5M6W3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clhc1Q5M6W3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Clhc1Q5M6W3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Clhc1Q5M6W3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19■□□□□ 0.63
Clhc1Q5M6W3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Clhc1Q5M6W3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clhc1Q5M6W3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Clhc1Q5M6W3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clhc1Q5M6W3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clhc1Q5M6W3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clhc1Q5M6W3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clhc1Q5M6W3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clhc1Q5M6W3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clhc1Q5M6W3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.97■□□□□ 0.63
Clhc1Q5M6W3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Clhc1Q5M6W3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clhc1Q5M6W3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clhc1Q5M6W3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.97■□□□□ 0.63
Clhc1Q5M6W3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms