Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.64■□□□□ 0.89
Vps41Q5KU39 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Vps41Q5KU39 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps41Q5KU39 Gm43566-201ENSMUST00000196851 808 ntBASIC20.64■□□□□ 0.89
Vps41Q5KU39 Gm10399-202ENSMUST00000202768 748 ntBASIC20.64■□□□□ 0.89
Vps41Q5KU39 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.64■□□□□ 0.89
Vps41Q5KU39 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps41Q5KU39 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps41Q5KU39 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Vps41Q5KU39 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps41Q5KU39 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps41Q5KU39 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps41Q5KU39 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps41Q5KU39 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps41Q5KU39 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps41Q5KU39 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.62■□□□□ 0.89
Vps41Q5KU39 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.62■□□□□ 0.89
Vps41Q5KU39 Gm5921-201ENSMUST00000075898 882 ntBASIC20.62■□□□□ 0.89
Vps41Q5KU39 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps41Q5KU39 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps41Q5KU39 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.61■□□□□ 0.89
Vps41Q5KU39 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps41Q5KU39 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps41Q5KU39 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps41Q5KU39 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps41Q5KU39 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps41Q5KU39 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps41Q5KU39 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps41Q5KU39 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps41Q5KU39 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vps41Q5KU39 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Vps41Q5KU39 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps41Q5KU39 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.6■□□□□ 0.89
Vps41Q5KU39 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps41Q5KU39 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Vps41Q5KU39 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps41Q5KU39 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Vps41Q5KU39 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps41Q5KU39 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps41Q5KU39 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Vps41Q5KU39 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps41Q5KU39 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps41Q5KU39 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps41Q5KU39 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps41Q5KU39 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps41Q5KU39 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps41Q5KU39 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.58■□□□□ 0.89
Vps41Q5KU39 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps41Q5KU39 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
Vps41Q5KU39 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Vps41Q5KU39 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.58■□□□□ 0.88
Vps41Q5KU39 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
Vps41Q5KU39 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.57■□□□□ 0.88
Vps41Q5KU39 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps41Q5KU39 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.56■□□□□ 0.88
Vps41Q5KU39 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps41Q5KU39 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.56■□□□□ 0.88
Vps41Q5KU39 Gm10232-201ENSMUST00000089221 720 ntBASIC20.56■□□□□ 0.88
Vps41Q5KU39 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps41Q5KU39 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps41Q5KU39 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps41Q5KU39 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps41Q5KU39 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps41Q5KU39 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps41Q5KU39 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps41Q5KU39 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps41Q5KU39 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps41Q5KU39 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps41Q5KU39 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps41Q5KU39 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps41Q5KU39 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.53■□□□□ 0.88
Vps41Q5KU39 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps41Q5KU39 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Vps41Q5KU39 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Vps41Q5KU39 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps41Q5KU39 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps41Q5KU39 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps41Q5KU39 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps41Q5KU39 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps41Q5KU39 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps41Q5KU39 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps41Q5KU39 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Vps41Q5KU39 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps41Q5KU39 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps41Q5KU39 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps41Q5KU39 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.52■□□□□ 0.88
Vps41Q5KU39 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps41Q5KU39 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 154.9 ms